From abf32e1537f19a60e38b2bd50fc91a502c81a533 Mon Sep 17 00:00:00 2001 From: Damien Jaime Date: Thu, 7 Dec 2023 23:34:12 +0100 Subject: [PATCH] v1.0.0 --- .gitignore | 34 ++ .mvn/wrapper/maven-wrapper.jar | Bin 0 -> 62547 bytes .mvn/wrapper/maven-wrapper.properties | 2 + CITATION.cff | 17 + LICENSE | 201 ++++++++++++ mvnw | 308 ++++++++++++++++++ mvnw.cmd | 205 ++++++++++++ pom.xml | 60 ++++ readme.md | 55 ++++ .../Neo4jEcosystemWeaverApplication.java | 17 + .../api/controllers/ArtifactController.java | 80 +++++ .../api/controllers/CypherController.java | 52 +++ .../api/controllers/ReleaseController.java | 112 +++++++ .../api/controllers/UtilsController.java | 22 ++ .../api/entities/ArtifactQuery.java | 40 +++ .../api/entities/CypherQuery.java | 27 ++ .../api/entities/ReleaseQuery.java | 53 +++ .../neo4jEcosystemWeaver/utils/ApiUtils.java | 39 +++ .../utils/GraphUtils.java | 32 ++ .../utils/Neo4jDriverSingleton.java | 28 ++ .../utils/Neo4jUtils.java | 56 ++++ .../utils/OsvDataSingleton.java | 27 ++ .../utils/OsvProceeding.java | 134 ++++++++ .../neo4jEcosystemWeaver/weaver/Weaver.java | 68 ++++ .../weaver/addedValue/AddedValue.java | 7 + .../weaver/addedValue/AddedValueEnum.java | 9 + .../weaver/addedValue/Cve.java | 34 ++ .../weaver/addedValue/CveAggregated.java | 41 +++ .../weaver/addedValue/Freshness.java | 33 ++ .../addedValue/FreshnessAggregated.java | 48 +++ .../weaver/addedValue/Speed.java | 67 ++++ .../weaver/common/ReusedCalculation.java | 90 +++++ src/main/resources/application.properties | 1 + .../Neo4jEcosystemWeaverApplicationTests.java | 13 + 34 files changed, 2012 insertions(+) create mode 100644 .gitignore create mode 100644 .mvn/wrapper/maven-wrapper.jar create mode 100644 .mvn/wrapper/maven-wrapper.properties create mode 100644 CITATION.cff create mode 100644 LICENSE create mode 100644 mvnw create mode 100644 mvnw.cmd create mode 100644 pom.xml create mode 100644 readme.md create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplication.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ArtifactController.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/CypherController.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ReleaseController.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/UtilsController.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ArtifactQuery.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/CypherQuery.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ReleaseQuery.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/ApiUtils.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/GraphUtils.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jDriverSingleton.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jUtils.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvDataSingleton.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvProceeding.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/Weaver.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValue.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValueEnum.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Cve.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/CveAggregated.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Freshness.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/FreshnessAggregated.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Speed.java create mode 100644 src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/common/ReusedCalculation.java create mode 100644 src/main/resources/application.properties create mode 100644 src/test/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplicationTests.java diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..f19a265 --- /dev/null +++ b/.gitignore @@ -0,0 +1,34 @@ +HELP.md +target/ +!.mvn/wrapper/maven-wrapper.jar +!**/src/main/**/target/ +!**/src/test/**/target/ + +### STS ### +.apt_generated +.classpath +.factorypath +.project +.settings +.springBeans +.sts4-cache + +### IntelliJ IDEA ### +.idea +*.iws +*.iml +*.ipr + +### NetBeans ### 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b/.mvn/wrapper/maven-wrapper.properties @@ -0,0 +1,2 @@ +distributionUrl=https://repo.maven.apache.org/maven2/org/apache/maven/apache-maven/3.9.2/apache-maven-3.9.2-bin.zip +wrapperUrl=https://repo.maven.apache.org/maven2/org/apache/maven/wrapper/maven-wrapper/3.2.0/maven-wrapper-3.2.0.jar diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 0000000..712e515 --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,17 @@ +cff-version: 1.2.0 +message: "If you use this software, please cite it as below." +authors: +- family-names: "Jaime" + given-names: "Damien" + orcid: "https://orcid.org/0000-0002-7503-4606" +- family-names: "El Haddad" + given-names: "Joyce" + orcid: "https://orcid.org/0000-0002-2709-2430" +- family-names: "Poizat" + given-names: "Pascal" + orcid: "https://orcid.org/0000-0001-7979-9510" +title: "Goblin-Weaver" +version: 1.0.0 +doi: 10.5281/zenodo.10291589 +date-released: 2023-12-07 +url: "https://github.com/Goblin-Ecosystem/goblinWeaver" \ No newline at end of file diff --git a/LICENSE b/LICENSE new file mode 100644 index 0000000..261eeb9 --- /dev/null +++ b/LICENSE @@ -0,0 +1,201 @@ + Apache License + Version 2.0, January 2004 + http://www.apache.org/licenses/ + + TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION + + 1. 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We also recommend that a + file or class name and description of purpose be included on the + same "printed page" as the copyright notice for easier + identification within third-party archives. + + Copyright [yyyy] [name of copyright owner] + + Licensed under the Apache License, Version 2.0 (the "License"); + you may not use this file except in compliance with the License. + You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + + Unless required by applicable law or agreed to in writing, software + distributed under the License is distributed on an "AS IS" BASIS, + WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + See the License for the specific language governing permissions and + limitations under the License. diff --git a/mvnw b/mvnw new file mode 100644 index 0000000..66df285 --- /dev/null +++ b/mvnw @@ -0,0 +1,308 @@ +#!/bin/sh +# ---------------------------------------------------------------------------- +# Licensed to the Apache Software Foundation (ASF) under one +# or more contributor license agreements. See the NOTICE file +# distributed with this work for additional information +# regarding copyright ownership. The ASF licenses this file +# to you under the Apache License, Version 2.0 (the +# "License"); you may not use this file except in compliance +# with the License. You may obtain a copy of the License at +# +# https://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, +# software distributed under the License is distributed on an +# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY +# KIND, either express or implied. See the License for the +# specific language governing permissions and limitations +# under the License. +# ---------------------------------------------------------------------------- + +# ---------------------------------------------------------------------------- +# Apache Maven Wrapper startup batch script, version 3.2.0 +# +# Required ENV vars: +# ------------------ +# JAVA_HOME - location of a JDK home dir +# +# Optional ENV vars +# ----------------- +# MAVEN_OPTS - parameters passed to the Java VM when running Maven +# e.g. to debug Maven itself, use +# set MAVEN_OPTS=-Xdebug -Xrunjdwp:transport=dt_socket,server=y,suspend=y,address=8000 +# MAVEN_SKIP_RC - flag to disable loading of mavenrc files +# ---------------------------------------------------------------------------- + +if [ -z "$MAVEN_SKIP_RC" ] ; then + + if [ -f /usr/local/etc/mavenrc ] ; then + . /usr/local/etc/mavenrc + fi + + if [ -f /etc/mavenrc ] ; then + . /etc/mavenrc + fi + + if [ -f "$HOME/.mavenrc" ] ; then + . "$HOME/.mavenrc" + fi + +fi + +# OS specific support. $var _must_ be set to either true or false. +cygwin=false; +darwin=false; +mingw=false +case "$(uname)" in + CYGWIN*) cygwin=true ;; + MINGW*) mingw=true;; + Darwin*) darwin=true + # Use /usr/libexec/java_home if available, otherwise fall back to /Library/Java/Home + # See https://developer.apple.com/library/mac/qa/qa1170/_index.html + if [ -z "$JAVA_HOME" ]; then + if [ -x "/usr/libexec/java_home" ]; then + JAVA_HOME="$(/usr/libexec/java_home)"; export JAVA_HOME + else + JAVA_HOME="/Library/Java/Home"; export JAVA_HOME + fi + fi + ;; +esac + +if [ -z "$JAVA_HOME" ] ; then + if [ -r /etc/gentoo-release ] ; then + JAVA_HOME=$(java-config --jre-home) + fi +fi + +# For Cygwin, ensure paths are in UNIX format before anything is touched +if $cygwin ; then + [ -n "$JAVA_HOME" ] && + JAVA_HOME=$(cygpath --unix "$JAVA_HOME") + [ -n "$CLASSPATH" ] && + CLASSPATH=$(cygpath --path --unix "$CLASSPATH") +fi + +# For Mingw, ensure paths are in UNIX format before anything is touched +if $mingw ; then + [ -n "$JAVA_HOME" ] && [ -d "$JAVA_HOME" ] && + JAVA_HOME="$(cd "$JAVA_HOME" || (echo "cannot cd into $JAVA_HOME."; exit 1); pwd)" +fi + +if [ -z "$JAVA_HOME" ]; then + javaExecutable="$(which javac)" + if [ -n "$javaExecutable" ] && ! [ "$(expr "\"$javaExecutable\"" : '\([^ ]*\)')" = "no" ]; then + # readlink(1) is not available as standard on Solaris 10. + readLink=$(which readlink) + if [ ! "$(expr "$readLink" : '\([^ ]*\)')" = "no" ]; then + if $darwin ; then + javaHome="$(dirname "\"$javaExecutable\"")" + javaExecutable="$(cd "\"$javaHome\"" && pwd -P)/javac" + else + javaExecutable="$(readlink -f "\"$javaExecutable\"")" + fi + javaHome="$(dirname "\"$javaExecutable\"")" + javaHome=$(expr "$javaHome" : '\(.*\)/bin') + JAVA_HOME="$javaHome" + export JAVA_HOME + fi + fi +fi + +if [ -z "$JAVACMD" ] ; then + if [ -n "$JAVA_HOME" ] ; then + if [ -x "$JAVA_HOME/jre/sh/java" ] ; then + # IBM's JDK on AIX uses strange locations for the executables + JAVACMD="$JAVA_HOME/jre/sh/java" + else + JAVACMD="$JAVA_HOME/bin/java" + fi + else + JAVACMD="$(\unset -f command 2>/dev/null; \command -v java)" + fi +fi + +if [ ! -x "$JAVACMD" ] ; then + echo "Error: JAVA_HOME is not defined correctly." >&2 + echo " We cannot execute $JAVACMD" >&2 + exit 1 +fi + +if [ -z "$JAVA_HOME" ] ; then + echo "Warning: JAVA_HOME environment variable is not set." +fi + +# traverses directory structure from process work directory to filesystem root +# first directory with .mvn subdirectory is considered project base directory +find_maven_basedir() { + if [ -z "$1" ] + then + echo "Path not specified to find_maven_basedir" + return 1 + fi + + basedir="$1" + wdir="$1" + while [ "$wdir" != '/' ] ; do + if [ -d "$wdir"/.mvn ] ; then + basedir=$wdir + break + fi + # workaround for JBEAP-8937 (on Solaris 10/Sparc) + if [ -d "${wdir}" ]; then + wdir=$(cd "$wdir/.." || exit 1; pwd) + fi + # end of workaround + done + printf '%s' "$(cd "$basedir" || exit 1; pwd)" +} + +# concatenates all lines of a file +concat_lines() { + if [ -f "$1" ]; then + # Remove \r in case we run on Windows within Git Bash + # and check out the repository with auto CRLF management + # enabled. Otherwise, we may read lines that are delimited with + # \r\n and produce $'-Xarg\r' rather than -Xarg due to word + # splitting rules. + tr -s '\r\n' ' ' < "$1" + fi +} + +log() { + if [ "$MVNW_VERBOSE" = true ]; then + printf '%s\n' "$1" + fi +} + +BASE_DIR=$(find_maven_basedir "$(dirname "$0")") +if [ -z "$BASE_DIR" ]; then + exit 1; +fi + +MAVEN_PROJECTBASEDIR=${MAVEN_BASEDIR:-"$BASE_DIR"}; export MAVEN_PROJECTBASEDIR +log "$MAVEN_PROJECTBASEDIR" + +########################################################################################## +# Extension to allow automatically downloading the maven-wrapper.jar from Maven-central +# This allows using the maven wrapper in projects that prohibit checking in binary data. +########################################################################################## +wrapperJarPath="$MAVEN_PROJECTBASEDIR/.mvn/wrapper/maven-wrapper.jar" +if [ -r "$wrapperJarPath" ]; then + log "Found $wrapperJarPath" +else + log "Couldn't find $wrapperJarPath, downloading it ..." + + if [ -n "$MVNW_REPOURL" ]; then + wrapperUrl="$MVNW_REPOURL/org/apache/maven/wrapper/maven-wrapper/3.2.0/maven-wrapper-3.2.0.jar" + else + wrapperUrl="https://repo.maven.apache.org/maven2/org/apache/maven/wrapper/maven-wrapper/3.2.0/maven-wrapper-3.2.0.jar" + fi + while IFS="=" read -r key value; do + # Remove '\r' from value to allow usage on windows as IFS does not consider '\r' as a separator ( considers space, tab, new line ('\n'), and custom '=' ) + safeValue=$(echo "$value" | tr -d '\r') + case "$key" in (wrapperUrl) wrapperUrl="$safeValue"; break ;; + esac + done < "$MAVEN_PROJECTBASEDIR/.mvn/wrapper/maven-wrapper.properties" + log "Downloading from: $wrapperUrl" + + if $cygwin; then + wrapperJarPath=$(cygpath --path --windows "$wrapperJarPath") + fi + + if command -v wget > /dev/null; then + log "Found wget ... using wget" + [ "$MVNW_VERBOSE" = true ] && QUIET="" || QUIET="--quiet" + if [ -z "$MVNW_USERNAME" ] || [ -z "$MVNW_PASSWORD" ]; then + wget $QUIET "$wrapperUrl" -O "$wrapperJarPath" || rm -f "$wrapperJarPath" + else + wget $QUIET --http-user="$MVNW_USERNAME" --http-password="$MVNW_PASSWORD" "$wrapperUrl" -O "$wrapperJarPath" || rm -f "$wrapperJarPath" + fi + elif command -v curl > /dev/null; then + log "Found curl ... using curl" + [ "$MVNW_VERBOSE" = true ] && QUIET="" || QUIET="--silent" + if [ -z "$MVNW_USERNAME" ] || [ -z "$MVNW_PASSWORD" ]; then + curl $QUIET -o "$wrapperJarPath" "$wrapperUrl" -f -L || rm -f "$wrapperJarPath" + else + curl $QUIET --user "$MVNW_USERNAME:$MVNW_PASSWORD" -o "$wrapperJarPath" "$wrapperUrl" -f -L || rm -f "$wrapperJarPath" + fi + else + log "Falling back to using Java to download" + javaSource="$MAVEN_PROJECTBASEDIR/.mvn/wrapper/MavenWrapperDownloader.java" + javaClass="$MAVEN_PROJECTBASEDIR/.mvn/wrapper/MavenWrapperDownloader.class" + # For Cygwin, switch paths to Windows format before running javac + if $cygwin; then + javaSource=$(cygpath --path --windows "$javaSource") + javaClass=$(cygpath --path --windows "$javaClass") + fi + if [ -e "$javaSource" ]; then + if [ ! -e "$javaClass" ]; then + log " - Compiling MavenWrapperDownloader.java ..." + ("$JAVA_HOME/bin/javac" "$javaSource") + fi + if [ -e "$javaClass" ]; then + log " - Running MavenWrapperDownloader.java ..." + ("$JAVA_HOME/bin/java" -cp .mvn/wrapper MavenWrapperDownloader "$wrapperUrl" "$wrapperJarPath") || rm -f "$wrapperJarPath" + fi + fi + fi +fi +########################################################################################## +# End of extension +########################################################################################## + +# If specified, validate the SHA-256 sum of the Maven wrapper jar file +wrapperSha256Sum="" +while IFS="=" read -r key value; do + case "$key" in (wrapperSha256Sum) wrapperSha256Sum=$value; break ;; + esac +done < "$MAVEN_PROJECTBASEDIR/.mvn/wrapper/maven-wrapper.properties" +if [ -n "$wrapperSha256Sum" ]; then + wrapperSha256Result=false + if command -v sha256sum > /dev/null; then + if echo "$wrapperSha256Sum $wrapperJarPath" | sha256sum -c > /dev/null 2>&1; then + wrapperSha256Result=true + fi + elif command -v shasum > /dev/null; then + if echo "$wrapperSha256Sum $wrapperJarPath" | shasum -a 256 -c > /dev/null 2>&1; then + wrapperSha256Result=true + fi + else + echo "Checksum validation was requested but neither 'sha256sum' or 'shasum' are available." + echo "Please install either command, or disable validation by removing 'wrapperSha256Sum' from your maven-wrapper.properties." + exit 1 + fi + if [ $wrapperSha256Result = false ]; then + echo "Error: Failed to validate Maven wrapper SHA-256, your Maven wrapper might be compromised." >&2 + echo "Investigate or delete $wrapperJarPath to attempt a clean download." >&2 + echo "If you updated your Maven version, you need to update the specified wrapperSha256Sum property." >&2 + exit 1 + fi +fi + +MAVEN_OPTS="$(concat_lines "$MAVEN_PROJECTBASEDIR/.mvn/jvm.config") $MAVEN_OPTS" + +# For Cygwin, switch paths to Windows format before running java +if $cygwin; then + [ -n "$JAVA_HOME" ] && + JAVA_HOME=$(cygpath --path --windows "$JAVA_HOME") + [ -n "$CLASSPATH" ] && + CLASSPATH=$(cygpath --path --windows "$CLASSPATH") + [ -n "$MAVEN_PROJECTBASEDIR" ] && + MAVEN_PROJECTBASEDIR=$(cygpath --path --windows "$MAVEN_PROJECTBASEDIR") +fi + +# Provide a "standardized" way to retrieve the CLI args that will +# work with both Windows and non-Windows executions. +MAVEN_CMD_LINE_ARGS="$MAVEN_CONFIG $*" +export MAVEN_CMD_LINE_ARGS + +WRAPPER_LAUNCHER=org.apache.maven.wrapper.MavenWrapperMain + +# shellcheck disable=SC2086 # safe args +exec "$JAVACMD" \ + $MAVEN_OPTS \ + $MAVEN_DEBUG_OPTS \ + -classpath "$MAVEN_PROJECTBASEDIR/.mvn/wrapper/maven-wrapper.jar" \ + "-Dmaven.multiModuleProjectDirectory=${MAVEN_PROJECTBASEDIR}" \ + ${WRAPPER_LAUNCHER} $MAVEN_CONFIG "$@" diff --git a/mvnw.cmd b/mvnw.cmd new file mode 100644 index 0000000..95ba6f5 --- /dev/null +++ b/mvnw.cmd @@ -0,0 +1,205 @@ +@REM ---------------------------------------------------------------------------- +@REM Licensed to the Apache Software Foundation (ASF) under one +@REM or more contributor license agreements. See the NOTICE file +@REM distributed with this work for additional information +@REM regarding copyright ownership. The ASF licenses this file +@REM to you under the Apache License, Version 2.0 (the +@REM "License"); you may not use this file except in compliance +@REM with the License. You may obtain a copy of the License at +@REM +@REM https://www.apache.org/licenses/LICENSE-2.0 +@REM +@REM Unless required by applicable law or agreed to in writing, +@REM software distributed under the License is distributed on an +@REM "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY +@REM KIND, either express or implied. See the License for the +@REM specific language governing permissions and limitations +@REM under the License. +@REM ---------------------------------------------------------------------------- + +@REM ---------------------------------------------------------------------------- +@REM Apache Maven Wrapper startup batch script, version 3.2.0 +@REM +@REM Required ENV vars: +@REM JAVA_HOME - location of a JDK home dir +@REM +@REM Optional ENV vars +@REM MAVEN_BATCH_ECHO - set to 'on' to enable the echoing of the batch commands +@REM MAVEN_BATCH_PAUSE - set to 'on' to wait for a keystroke before ending +@REM MAVEN_OPTS - parameters passed to the Java VM when running Maven +@REM e.g. to debug Maven itself, use +@REM set MAVEN_OPTS=-Xdebug -Xrunjdwp:transport=dt_socket,server=y,suspend=y,address=8000 +@REM MAVEN_SKIP_RC - flag to disable loading of mavenrc files +@REM ---------------------------------------------------------------------------- + +@REM Begin all REM lines with '@' in case MAVEN_BATCH_ECHO is 'on' +@echo off +@REM set title of command window +title %0 +@REM enable echoing by setting MAVEN_BATCH_ECHO to 'on' +@if "%MAVEN_BATCH_ECHO%" == "on" echo %MAVEN_BATCH_ECHO% + +@REM set %HOME% to equivalent of $HOME +if "%HOME%" == "" (set "HOME=%HOMEDRIVE%%HOMEPATH%") + +@REM Execute a user defined script before this one +if not "%MAVEN_SKIP_RC%" == "" goto skipRcPre +@REM check for pre script, once with legacy .bat ending and once with .cmd ending +if exist "%USERPROFILE%\mavenrc_pre.bat" call "%USERPROFILE%\mavenrc_pre.bat" %* +if exist "%USERPROFILE%\mavenrc_pre.cmd" call "%USERPROFILE%\mavenrc_pre.cmd" %* +:skipRcPre + +@setlocal + +set ERROR_CODE=0 + +@REM To isolate internal variables from possible post scripts, we use another setlocal +@setlocal + +@REM ==== START VALIDATION ==== +if not "%JAVA_HOME%" == "" goto OkJHome + +echo. +echo Error: JAVA_HOME not found in your environment. >&2 +echo Please set the JAVA_HOME variable in your environment to match the >&2 +echo location of your Java installation. >&2 +echo. +goto error + +:OkJHome +if exist "%JAVA_HOME%\bin\java.exe" goto init + +echo. +echo Error: JAVA_HOME is set to an invalid directory. >&2 +echo JAVA_HOME = "%JAVA_HOME%" >&2 +echo Please set the JAVA_HOME variable in your environment to match the >&2 +echo location of your Java installation. >&2 +echo. +goto error + +@REM ==== END VALIDATION ==== + +:init + +@REM Find the project base dir, i.e. the directory that contains the folder ".mvn". +@REM Fallback to current working directory if not found. + +set MAVEN_PROJECTBASEDIR=%MAVEN_BASEDIR% +IF NOT "%MAVEN_PROJECTBASEDIR%"=="" goto endDetectBaseDir + +set EXEC_DIR=%CD% +set WDIR=%EXEC_DIR% +:findBaseDir +IF EXIST "%WDIR%"\.mvn goto baseDirFound +cd .. +IF "%WDIR%"=="%CD%" goto baseDirNotFound +set WDIR=%CD% +goto findBaseDir + +:baseDirFound +set MAVEN_PROJECTBASEDIR=%WDIR% +cd "%EXEC_DIR%" +goto endDetectBaseDir + +:baseDirNotFound +set MAVEN_PROJECTBASEDIR=%EXEC_DIR% +cd "%EXEC_DIR%" + +:endDetectBaseDir + +IF NOT EXIST "%MAVEN_PROJECTBASEDIR%\.mvn\jvm.config" goto endReadAdditionalConfig + +@setlocal EnableExtensions EnableDelayedExpansion +for /F "usebackq delims=" %%a in ("%MAVEN_PROJECTBASEDIR%\.mvn\jvm.config") do set JVM_CONFIG_MAVEN_PROPS=!JVM_CONFIG_MAVEN_PROPS! %%a +@endlocal & set JVM_CONFIG_MAVEN_PROPS=%JVM_CONFIG_MAVEN_PROPS% + +:endReadAdditionalConfig + +SET MAVEN_JAVA_EXE="%JAVA_HOME%\bin\java.exe" +set WRAPPER_JAR="%MAVEN_PROJECTBASEDIR%\.mvn\wrapper\maven-wrapper.jar" +set WRAPPER_LAUNCHER=org.apache.maven.wrapper.MavenWrapperMain + +set WRAPPER_URL="https://repo.maven.apache.org/maven2/org/apache/maven/wrapper/maven-wrapper/3.2.0/maven-wrapper-3.2.0.jar" + +FOR /F "usebackq tokens=1,2 delims==" %%A IN ("%MAVEN_PROJECTBASEDIR%\.mvn\wrapper\maven-wrapper.properties") DO ( + IF "%%A"=="wrapperUrl" SET WRAPPER_URL=%%B +) + +@REM Extension to allow automatically downloading the maven-wrapper.jar from Maven-central +@REM This allows using the maven wrapper in projects that prohibit checking in binary data. +if exist %WRAPPER_JAR% ( + if "%MVNW_VERBOSE%" == "true" ( + echo Found %WRAPPER_JAR% + ) +) else ( + if not "%MVNW_REPOURL%" == "" ( + SET WRAPPER_URL="%MVNW_REPOURL%/org/apache/maven/wrapper/maven-wrapper/3.2.0/maven-wrapper-3.2.0.jar" + ) + if "%MVNW_VERBOSE%" == "true" ( + echo Couldn't find %WRAPPER_JAR%, downloading it ... + echo Downloading from: %WRAPPER_URL% + ) + + powershell -Command "&{"^ + "$webclient = new-object System.Net.WebClient;"^ + "if (-not ([string]::IsNullOrEmpty('%MVNW_USERNAME%') -and [string]::IsNullOrEmpty('%MVNW_PASSWORD%'))) {"^ + "$webclient.Credentials = new-object System.Net.NetworkCredential('%MVNW_USERNAME%', '%MVNW_PASSWORD%');"^ + "}"^ + "[Net.ServicePointManager]::SecurityProtocol = [Net.SecurityProtocolType]::Tls12; $webclient.DownloadFile('%WRAPPER_URL%', '%WRAPPER_JAR%')"^ + "}" + if "%MVNW_VERBOSE%" == "true" ( + echo Finished downloading %WRAPPER_JAR% + ) +) +@REM End of extension + +@REM If specified, validate the SHA-256 sum of the Maven wrapper jar file +SET WRAPPER_SHA_256_SUM="" +FOR /F "usebackq tokens=1,2 delims==" %%A IN ("%MAVEN_PROJECTBASEDIR%\.mvn\wrapper\maven-wrapper.properties") DO ( + IF "%%A"=="wrapperSha256Sum" SET WRAPPER_SHA_256_SUM=%%B +) +IF NOT %WRAPPER_SHA_256_SUM%=="" ( + powershell -Command "&{"^ + "$hash = (Get-FileHash \"%WRAPPER_JAR%\" -Algorithm SHA256).Hash.ToLower();"^ + "If('%WRAPPER_SHA_256_SUM%' -ne $hash){"^ + " Write-Output 'Error: Failed to validate Maven wrapper SHA-256, your Maven wrapper might be compromised.';"^ + " Write-Output 'Investigate or delete %WRAPPER_JAR% to attempt a clean download.';"^ + " Write-Output 'If you updated your Maven version, you need to update the specified wrapperSha256Sum property.';"^ + " exit 1;"^ + "}"^ + "}" + if ERRORLEVEL 1 goto error +) + +@REM Provide a "standardized" way to retrieve the CLI args that will +@REM work with both Windows and non-Windows executions. +set MAVEN_CMD_LINE_ARGS=%* + +%MAVEN_JAVA_EXE% ^ + %JVM_CONFIG_MAVEN_PROPS% ^ + %MAVEN_OPTS% ^ + %MAVEN_DEBUG_OPTS% ^ + -classpath %WRAPPER_JAR% ^ + "-Dmaven.multiModuleProjectDirectory=%MAVEN_PROJECTBASEDIR%" ^ + %WRAPPER_LAUNCHER% %MAVEN_CONFIG% %* +if ERRORLEVEL 1 goto error +goto end + +:error +set ERROR_CODE=1 + +:end +@endlocal & set ERROR_CODE=%ERROR_CODE% + +if not "%MAVEN_SKIP_RC%"=="" goto skipRcPost +@REM check for post script, once with legacy .bat ending and once with .cmd ending +if exist "%USERPROFILE%\mavenrc_post.bat" call "%USERPROFILE%\mavenrc_post.bat" +if exist "%USERPROFILE%\mavenrc_post.cmd" call "%USERPROFILE%\mavenrc_post.cmd" +:skipRcPost + +@REM pause the script if MAVEN_BATCH_PAUSE is set to 'on' +if "%MAVEN_BATCH_PAUSE%"=="on" pause + +if "%MAVEN_TERMINATE_CMD%"=="on" exit %ERROR_CODE% + +cmd /C exit /B %ERROR_CODE% diff --git a/pom.xml b/pom.xml new file mode 100644 index 0000000..b2d4c14 --- /dev/null +++ b/pom.xml @@ -0,0 +1,60 @@ + + + 4.0.0 + + org.springframework.boot + spring-boot-starter-parent + 3.1.1 + + + com.cifre.sap.su + goblinWeaver + 1.0.0 + goblinWeaver + Weaver to query Neo4j ecosystem dependency graph + + 17 + + + + org.springdoc + springdoc-openapi-starter-webmvc-ui + 2.2.0 + + + org.springframework.boot + spring-boot-starter-validation + + + org.springframework.boot + spring-boot-starter-web + + + org.springframework.boot + spring-boot-starter-test + test + + + org.neo4j.driver + neo4j-java-driver + 5.6.0 + + + com.googlecode.json-simple + json-simple + 1.1.1 + + + + + + + + org.springframework.boot + spring-boot-maven-plugin + + + + + diff --git a/readme.md b/readme.md new file mode 100644 index 0000000..8d9894d --- /dev/null +++ b/readme.md @@ -0,0 +1,55 @@ +# Gobelin Weaver +[![License](https://img.shields.io/badge/license-Apache%202.0-blue.svg)](LICENSE.txt) + +The Weaver is a REST API that takes a Cypher query and desired additional information as input and returns the result of this query on a Neo4j ecosystem dependency graph, enriching it on the fly according to the user’s needs. + +This weaver comes in addition to the ecosystem dependency graph miner available here: https://github.com/Goblin-Ecosystem/goblinWeaver. +An example of usage of this tool is available here: https://github.com/Goblin-Ecosystem/mavenDatasetExperiences +A Zenodo archive that contains the associated dataset dump and the Weaver jar is available here: https://zenodo.org/records/10291589. + +If you use the dataset dump present in Zenodo, please use a Neo4j version 4.x. + +## Added values +- CVE: We use the osv.dev dataset to get CVEs information (https://osv.dev/). +- CVE_AGGREGATED: Aggregate release and dependencies (with transitivity) CVE. +- FRESHNESS: Corresponds, for a specific release, to the number of more recent releases available and to the time elapsed in milliseconds between the specific release and the most recent release. +- FRESHNESS_AGGREGATED: Aggregate release and dependencies (with transitivity) freshness. +- SPEED: Corresponds to the average number of releases per day of an artifact. More information here: https://benevol2022.github.io/papers/DamienJaime.pdf + +## Requirements +- Java 17 +- Maven, with MAVEN_HOME defines +- An active Neo4j database containing the Maven Central dependency graph. + +## Build +To build this project, run: +> mvn clean package + +## Run +To launch the API, you must provide the URI, user and password of your Neo4J database containing the Maven Central dependency graph. +The program will first download the osv.dev dataset and create a folder called "osvData", it's takes approximately 3m30s. +If you already have downloaded this dataset and you don't want to update it, you can add the "noUpdate" argument on the java -jar command. + +Example: +> java -Dneo4jUri="bolt://localhost:7687/" -Dneo4jUser="neo4j" -Dneo4jPassword="Password1" -jar .\target\goblinWeaver-1.0.0.jar + + +> java -Dneo4jUri="bolt://localhost:7687/" -Dneo4jUser="neo4j" -Dneo4jPassword="Password1" -jar .\target\goblinWeaver-1.0.0.jar + +## Use the API +Pre-designed requests are available, but you can also send your own Cypher requests directly to the API. +You can add to the body query for the API a list of Added values, and it will enrich the result for you. + +A swagger documentation of the API is available here: +> http://localhost:8080/swagger-ui/index.html + +## Add new added values +The Weaver is designed to be extensible, allowing a user to easily add information their research need. +Here's how to add an added value: +1. Go to weaver/addedValue/AddedValueEnum and add the name of your new value. +2. Create a new class that implements weaver/addedValue/AddedValue. +3. Write your internal logic in this new class. +4. Go to weaver/Weaver and modify the "getValuesToAdd" method to define which type of element your new value can be applied to (Release, Artifact, dependency edge or relationship_AR edges). + +## Licensing +Copyright 2023 SAP SE or an SAP affiliate company and Neo4j Ecosystem Weaver. Please see our [LICENSE](LICENSE) for copyright and license information. diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplication.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplication.java new file mode 100644 index 0000000..30c7e00 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplication.java @@ -0,0 +1,17 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver; + +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jDriverSingleton; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.OsvProceeding; +import org.springframework.boot.SpringApplication; +import org.springframework.boot.autoconfigure.SpringBootApplication; + +@SpringBootApplication +public class Neo4jEcosystemWeaverApplication { + + public static void main(String[] args) { + OsvProceeding.initOsvData(args); // Download CVE dataset + Neo4jDriverSingleton.getDriverInstance(); // Init database connection + SpringApplication.run(Neo4jEcosystemWeaverApplication.class, args); // Run API + } + +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ArtifactController.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ArtifactController.java new file mode 100644 index 0000000..2dc20b2 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ArtifactController.java @@ -0,0 +1,80 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.api.controllers; + +import com.cifre.sap.su.neo4jEcosystemWeaver.api.entities.ArtifactQuery; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jDriverSingleton; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jUtils; +import io.swagger.v3.oas.annotations.Operation; +import io.swagger.v3.oas.annotations.tags.Tag; +import org.neo4j.driver.*; +import org.neo4j.driver.Record; +import org.neo4j.driver.types.TypeSystem; +import org.neo4j.driver.util.Pair; +import org.springframework.web.bind.annotation.PostMapping; +import org.springframework.web.bind.annotation.RequestBody; +import org.springframework.web.bind.annotation.RestController; + +import java.util.ArrayList; +import java.util.HashMap; +import java.util.List; +import java.util.Map; + +@RestController +@Tag(name = "Artifacts") +public class ArtifactController { + + @Operation( + description = "Get a specific artifact from groupId:ArtifactId with added values", + summary = "Get a specific artifact from GA" + ) + @PostMapping("/artifact") + public List> getSpecificArtifact(@RequestBody ArtifactQuery artifactQuery) { + String query = "MATCH (a:Artifact) " + + "WHERE a.id = '" + artifactQuery.toString() + "' " + + "RETURN a"; + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result result = session.run(query); + List> rows = new ArrayList<>(); + while (result.hasNext()) { + Record record = result.next(); + Map row = new HashMap<>(); + for (Pair pair : record.fields()) { + if (pair.value().hasType(TypeSystem.getDefault().NODE())){ + Map nodeMap = Neo4jUtils.generateNodeRow(pair, artifactQuery.getAddedValues()); + row.put("node", nodeMap); + } + } + rows.add(row); + } + return rows; + } + } + + @Operation( + description = "Get all releases of an artifact from groupId:ArtifactId with added values", + summary = "Get all releases of an artifact from GA" + ) + @PostMapping("/artifact/releases") + public List> getArtifactReleases(@RequestBody ArtifactQuery artifactQuery) { + String query = "MATCH (a:Artifact)-[e:relationship_AR]->(r:Release) " + + "WHERE a.id = '" + artifactQuery.toString() + "' " + + "RETURN r"; + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result result = session.run(query); + List> rows = new ArrayList<>(); + while (result.hasNext()) { + Record record = result.next(); + Map row = new HashMap<>(); + for (Pair pair : record.fields()) { + if (pair.value().hasType(TypeSystem.getDefault().NODE())){ + Map nodeMap = Neo4jUtils.generateNodeRow(pair, artifactQuery.getAddedValues()); + row.put("node", nodeMap); + } + } + rows.add(row); + } + return rows; + } + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/CypherController.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/CypherController.java new file mode 100644 index 0000000..cf078be --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/CypherController.java @@ -0,0 +1,52 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.api.controllers; + +import com.cifre.sap.su.neo4jEcosystemWeaver.api.entities.CypherQuery; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jDriverSingleton; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jUtils; +import io.swagger.v3.oas.annotations.Operation; +import io.swagger.v3.oas.annotations.tags.Tag; +import org.neo4j.driver.*; +import org.neo4j.driver.Record; +import org.neo4j.driver.types.TypeSystem; +import org.neo4j.driver.util.Pair; +import org.springframework.web.bind.annotation.*; + +import java.util.*; + +@RestController +@Tag(name = "Cypher query") +public class CypherController { + + @Operation( + description = "Execute a cypher query to the dependency graph with added values", + summary = "Execute a cypher query" + ) + @PostMapping("/cypher") + public List> executeCypherQuery(@RequestBody CypherQuery queryRequest) { + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result result = session.run(queryRequest.getQuery()); + List> rows = new ArrayList<>(); + while (result.hasNext()) { + Record record = result.next(); + Map row = new HashMap<>(); + for (Pair pair : record.fields()) { + if (pair.value().hasType(TypeSystem.getDefault().NODE())){ + row.put("node", Neo4jUtils.generateNodeRow(pair, queryRequest.getAddedValues())); + } + else if (pair.value().hasType(TypeSystem.getDefault().RELATIONSHIP())){ + row.put("relationship", Neo4jUtils.generateRelationshipRow(pair, queryRequest.getAddedValues())); + } + else if (pair.value().hasType(TypeSystem.getDefault().PATH())) { + row.putAll(Neo4jUtils.generatePathRow(pair, queryRequest.getAddedValues())); + } + else{ + row.put(pair.key(), pair.value().toString().replaceAll("[\"]","")); + } + } + rows.add(row); + } + return rows; + } + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ReleaseController.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ReleaseController.java new file mode 100644 index 0000000..77be832 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/ReleaseController.java @@ -0,0 +1,112 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.api.controllers; + +import com.cifre.sap.su.neo4jEcosystemWeaver.api.entities.ReleaseQuery; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.GraphUtils; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jDriverSingleton; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jUtils; +import io.swagger.v3.oas.annotations.Operation; +import io.swagger.v3.oas.annotations.tags.Tag; +import org.neo4j.driver.*; +import org.neo4j.driver.Record; +import org.neo4j.driver.types.TypeSystem; +import org.neo4j.driver.util.Pair; +import org.springframework.web.bind.annotation.PostMapping; +import org.springframework.web.bind.annotation.RequestBody; +import org.springframework.web.bind.annotation.RestController; + +import java.util.*; +import java.util.stream.Collectors; + +@RestController +@Tag(name = "Releases") +public class ReleaseController { + + @Operation( + description = "Get a specific release from groupId:ArtifactId:Version with added values", + summary = "Get a specific release from GAV" + ) + @PostMapping("/release") + public List> getSpecificRelease(@RequestBody ReleaseQuery releaseQuery) { + String query = "MATCH (r:Release) " + + "WHERE r.id = '" + releaseQuery.toString() + "' " + + "RETURN r"; + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result result = session.run(query); + List> rows = new ArrayList<>(); + while (result.hasNext()) { + Record record = result.next(); + Map row = new HashMap<>(); + for (Pair pair : record.fields()) { + if (pair.value().hasType(TypeSystem.getDefault().NODE())){ + Map nodeMap = Neo4jUtils.generateNodeRow(pair, releaseQuery.getAddedValues()); + row.put("node", nodeMap); + } + } + rows.add(row); + } + return rows; + } + } + + @Operation( + description = "Get newer versions of a release from groupId:ArtifactId:Version with added values", + summary = "Get newer versions of a release from GAV" + ) + @PostMapping("/release/newVersions") + public List> getNewerReleases(@RequestBody ReleaseQuery releaseQuery) { + String queryTimestamp = "MATCH (r:Release) " + + "WHERE r.id = '" + releaseQuery.toString() + "' " + + "RETURN r.timestamp as timestamp"; + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result resultTimestamp = session.run(queryTimestamp); + long timestamp = resultTimestamp.next().fields().get(0).value().asLong(); + String queryNewReleases = "MATCH (a:Artifact)-[e:relationship_AR]->(r:Release) " + + "WHERE a.id = '" + releaseQuery.getGa() + "' AND r.timestamp > "+timestamp+" " + + "RETURN r"; + Result resultNewReleases = session.run(queryNewReleases); + List> rows = new ArrayList<>(); + while (resultNewReleases.hasNext()) { + Record record = resultNewReleases.next(); + Map row = new HashMap<>(); + for (Pair pair : record.fields()) { + if (pair.value().hasType(TypeSystem.getDefault().NODE())){ + Map nodeMap = Neo4jUtils.generateNodeRow(pair, releaseQuery.getAddedValues()); + row.put("node", nodeMap); + } + } + rows.add(row); + } + return rows; + } + } + + @Operation( + description = "Get dependents of a release from groupId:ArtifactId:Version with added values", + summary = "Get release dependents from GAV" + ) + @PostMapping("/release/dependents") + public List> getReleaseDependent(@RequestBody ReleaseQuery releaseQuery) { + String query = "MATCH (r:Release)-[d:dependency]->(a:Artifact) " + + "WHERE a.id = '"+releaseQuery.getGa()+"' AND d.targetVersion = '"+releaseQuery.getVersion()+"' " + + "RETURN r"; + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result result = session.run(query); + List> rows = new ArrayList<>(); + while (result.hasNext()) { + Record record = result.next(); + Map row = new HashMap<>(); + for (Pair pair : record.fields()) { + if (pair.value().hasType(TypeSystem.getDefault().NODE())){ + Map nodeMap = Neo4jUtils.generateNodeRow(pair, releaseQuery.getAddedValues()); + row.put("node", nodeMap); + } + } + rows.add(row); + } + return rows; + } + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/UtilsController.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/UtilsController.java new file mode 100644 index 0000000..c3c3331 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/controllers/UtilsController.java @@ -0,0 +1,22 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.api.controllers; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue.AddedValueEnum; +import io.swagger.v3.oas.annotations.Operation; +import io.swagger.v3.oas.annotations.tags.Tag; +import org.springframework.web.bind.annotation.GetMapping; +import org.springframework.web.bind.annotation.RestController; + + +@RestController +@Tag(name = "Utils") +public class UtilsController { + + @Operation( + description = "Get the list of existing added values on the Weaver", + summary = "Get existing added values" + ) + @GetMapping("/addedValues") + public AddedValueEnum[] getAddedValue() { + return AddedValueEnum.values(); + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ArtifactQuery.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ArtifactQuery.java new file mode 100644 index 0000000..31496eb --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ArtifactQuery.java @@ -0,0 +1,40 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.api.entities; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue.AddedValueEnum; + +import java.util.List; + +public class ArtifactQuery { + private String groupId; + private String artifactId; + private List addedValues; + + public String getGroupId() { + return groupId; + } + + public void setGroupId(String groupId) { + this.groupId = groupId; + } + + public String getArtifactId() { + return artifactId; + } + + public void setArtifactId(String artifactId) { + this.artifactId = artifactId; + } + + public List getAddedValues() { + return addedValues; + } + + public void setAddedValues(List addedValues) { + this.addedValues = addedValues; + } + + @Override + public String toString() { + return groupId+":"+artifactId; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/CypherQuery.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/CypherQuery.java new file mode 100644 index 0000000..6b180e6 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/CypherQuery.java @@ -0,0 +1,27 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.api.entities; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue.AddedValueEnum; + +import java.util.List; + +public class CypherQuery { + private String query; + private List addedValues; + + public String getQuery() { + return query; + } + + public void setQuery(String query) { + this.query = query; + } + + public List getAddedValues() { + return addedValues; + } + + public void setAddedValues(List addedValues) { + this.addedValues = addedValues; + } +} + diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ReleaseQuery.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ReleaseQuery.java new file mode 100644 index 0000000..4fccfd8 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/api/entities/ReleaseQuery.java @@ -0,0 +1,53 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.api.entities; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue.AddedValueEnum; + +import java.util.List; + +public class ReleaseQuery { + private String groupId; + private String artifactId; + private String version; + private List addedValues; + + public String getGroupId() { + return groupId; + } + + public void setGroupId(String groupId) { + this.groupId = groupId; + } + + public String getArtifactId() { + return artifactId; + } + + public void setArtifactId(String artifactId) { + this.artifactId = artifactId; + } + + public String getVersion() { + return version; + } + + public void setVersion(String version) { + this.version = version; + } + + public List getAddedValues() { + return addedValues; + } + + public void setAddedValues(List addedValues) { + this.addedValues = addedValues; + } + + public String getGa(){ + return groupId+":"+artifactId; + } + + @Override + public String toString() { + return groupId+":"+artifactId+":"+version; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/ApiUtils.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/ApiUtils.java new file mode 100644 index 0000000..3b86fbd --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/ApiUtils.java @@ -0,0 +1,39 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.utils; + +import org.json.simple.JSONObject; +import org.json.simple.parser.JSONParser; + +import java.io.IOException; +import java.io.InputStreamReader; +import java.io.OutputStream; +import java.net.HttpURLConnection; +import java.net.URL; +import java.nio.charset.StandardCharsets; + +public class ApiUtils { + + public static JSONObject callWithData(String urlString, String method, String data){ + try { + URL url = new URL(urlString); + HttpURLConnection http = (HttpURLConnection) url.openConnection(); + http.setRequestMethod(method); + http.setDoOutput(true); + http.setRequestProperty("Content-Type", "application/x-www-form-urlencoded"); + + byte[] out = data.getBytes(StandardCharsets.UTF_8); + + OutputStream stream = http.getOutputStream(); + stream.write(out); + + if(http.getResponseCode() == 200){ + JSONParser jsonParser = new JSONParser(); + return (JSONObject)jsonParser.parse( + new InputStreamReader(http.getInputStream(), StandardCharsets.UTF_8)); + } + http.disconnect(); + } catch (IOException | org.json.simple.parser.ParseException e) { + System.out.println("Unable to connect to API:\n" + e); + } + return null; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/GraphUtils.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/GraphUtils.java new file mode 100644 index 0000000..d711403 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/GraphUtils.java @@ -0,0 +1,32 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.utils; + +import org.neo4j.driver.*; +import org.neo4j.driver.Record; + +import java.util.*; + +public class GraphUtils { + + public static Set getGavAndDependenciesSetWithTransitive(String gav, Set visitedGav){ + if (visitedGav.contains(gav)) { + return visitedGav; + } + visitedGav.add(gav); + // Query to get the dependencies of the given release without test dependencies + String query = "MATCH (r:Release)-[d:dependency]->(a:Artifact) " + + "WHERE r.id = '" + gav + "' AND NOT (d.scope = 'test') " + + "RETURN a.id AS artifactId, d.targetVersion AS targetVersion"; + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result result = session.run(query); + while (result.hasNext()) { + Record record = result.next(); + String newGav = record.get("artifactId").toString().replaceAll("[\"]","") + +":" + +record.get("targetVersion").toString().replaceAll("[\"]",""); + getGavAndDependenciesSetWithTransitive(newGav, visitedGav); + } + } + return visitedGav; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jDriverSingleton.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jDriverSingleton.java new file mode 100644 index 0000000..6ef41c0 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jDriverSingleton.java @@ -0,0 +1,28 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.utils; + +import org.neo4j.driver.AuthTokens; +import org.neo4j.driver.Driver; +import org.neo4j.driver.GraphDatabase; + +public class Neo4jDriverSingleton { + + private static Driver driver; + + private Neo4jDriverSingleton() { + // private constructor to prevent instantiation + } + + public static Driver getDriverInstance() { + if (driver == null) { + synchronized (Neo4jDriverSingleton.class) { + if (driver == null) { + String uri = System.getProperty("neo4jUri"); + String user = System.getProperty("neo4jUser"); + String password = System.getProperty("neo4jPassword"); + driver = GraphDatabase.driver(uri, AuthTokens.basic(user, password)); + } + } + } + return driver; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jUtils.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jUtils.java new file mode 100644 index 0000000..6dbe1b3 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/Neo4jUtils.java @@ -0,0 +1,56 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.utils; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.Weaver; +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue.AddedValueEnum; +import org.neo4j.driver.Value; +import org.neo4j.driver.types.Node; +import org.neo4j.driver.types.Path; +import org.neo4j.driver.types.Relationship; +import org.neo4j.driver.util.Pair; + +import java.util.HashMap; +import java.util.List; +import java.util.Map; + +public class Neo4jUtils { + + public static Map generateNodeRow(Pair pair, List addedValues){ + Node node = pair.value().asNode(); + Map nodeMap = new HashMap<>(node.asMap()); + nodeMap.put("labels", node.labels()); + nodeMap.put("elementId", node.elementId()); + Weaver.fillNode(nodeMap, addedValues); + return nodeMap; + } + + public static Map generateRelationshipRow(Pair pair, List addedValues){ + Relationship relationship = pair.value().asRelationship(); + Map relationshipMap = new HashMap<>(relationship.asMap()); + relationshipMap.put("type", relationship.type()); + relationshipMap.put("sourceElementId", relationship.startNodeElementId()); + relationshipMap.put("targetElementId", relationship.endNodeElementId()); + Weaver.fillRelationship(relationshipMap, addedValues); + return relationshipMap; + } + + public static Map generatePathRow(Pair pair, List addedValues){ + Map row = new HashMap<>(); + Path path = pair.value().asPath(); + for (Node node : path.nodes()){ + Map nodeMap = new HashMap<>(node.asMap()); + nodeMap.put("labels", node.labels()); + nodeMap.put("elementId", node.elementId()); + Weaver.fillNode(nodeMap, addedValues); + row.put("node", nodeMap); + } + for (Relationship relationship : path.relationships()){ + Map relationshipMap = new HashMap<>(relationship.asMap()); + relationshipMap.put("type", relationship.type()); + relationshipMap.put("sourceElementId", relationship.startNodeElementId()); + relationshipMap.put("targetElementId", relationship.endNodeElementId()); + Weaver.fillRelationship(relationshipMap, addedValues); + row.put("relationship", relationshipMap); + } + return row; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvDataSingleton.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvDataSingleton.java new file mode 100644 index 0000000..6ac9e15 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvDataSingleton.java @@ -0,0 +1,27 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.utils; + +import org.json.simple.JSONObject; +import org.json.simple.parser.JSONParser; +import org.json.simple.parser.ParseException; +import java.io.FileReader; +import java.io.IOException; + +public class OsvDataSingleton { + private static JSONObject dataJsonObject; + + private OsvDataSingleton() { + // private constructor to prevent instantiation + } + + public static JSONObject getDataJsonObject() throws IOException, ParseException { + if (dataJsonObject == null) { + synchronized (OsvDataSingleton.class) { + if (dataJsonObject == null) { + JSONParser parser = new JSONParser(); + dataJsonObject = (JSONObject) parser.parse(new FileReader(OsvProceeding.AGGREGATED_DATA_FILE)); + } + } + } + return dataJsonObject; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvProceeding.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvProceeding.java new file mode 100644 index 0000000..51d6454 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/utils/OsvProceeding.java @@ -0,0 +1,134 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.utils; + +import org.json.simple.JSONArray; +import org.json.simple.JSONObject; +import org.json.simple.parser.JSONParser; +import org.json.simple.parser.ParseException; + +import java.io.*; +import java.net.MalformedURLException; +import java.net.URL; +import java.util.HashMap; +import java.util.Map; +import java.util.zip.ZipEntry; +import java.util.zip.ZipInputStream; + +public class OsvProceeding { + private static final String ROOT_PATH = "osvData"; + private static final String DATA_PATH = ROOT_PATH+"/maven"; + public static final String AGGREGATED_DATA_FILE = ROOT_PATH+"/aggregated_data.json"; + private static final String OSV_DATA_URL = "https://storage.googleapis.com/osv-vulnerabilities/Maven/all.zip"; + + public static void initOsvData(String[] args){ + boolean noUpdateFlag = false; + boolean dataFileExist = false; + for (String arg : args) { + if ("noUpdate".equals(arg)) { + noUpdateFlag = true; + File dataFile = new File(AGGREGATED_DATA_FILE); + dataFileExist = dataFile.exists(); + break; + } + } + if(noUpdateFlag && dataFileExist){ + return; + } + downloadOsvDatabase(); + createAggregateDataFile(); + try { + OsvDataSingleton.getDataJsonObject(); + } catch (IOException | ParseException e) { + e.printStackTrace(); + } + } + private static void createAggregateDataFile(){ + Map aggregatedData = new HashMap<>(); + try{ + File osvFolder = new File(DATA_PATH); + if (osvFolder.isDirectory()) { + File[] files = osvFolder.listFiles(); + System.out.println("Prepare osv aggregated json"); + for (File file : files) { + JSONParser parser = new JSONParser(); + JSONObject jsonObject = (JSONObject) parser.parse(new FileReader(file)); + JSONObject cveObject = new JSONObject(); + JSONArray aliases = jsonObject.get("aliases") == null ? new JSONArray() : (JSONArray) jsonObject.get("aliases"); + String cveName = aliases.size() == 0 ? "UNKNOWN" : aliases.get(0).toString(); + JSONObject database_specific = jsonObject.get("database_specific") == null ? new JSONObject() : (JSONObject) jsonObject.get("database_specific"); + String severity = database_specific.get("severity") == null ? "UNKNOWN" : database_specific.get("severity").toString(); + String cwe_ids = database_specific.get("cwe_ids") == null ? "UNKNOWN" : database_specific.get("cwe_ids").toString(); + cveObject.put("name", cveName.replaceAll("[\"]","")); + cveObject.put("severity", severity.replaceAll("[\"]","")); + cveObject.put("cwe_ids", cwe_ids.replaceAll("[\"]","")); + JSONArray affectedPackages = (JSONArray) jsonObject.get("affected"); + for (Object obj : affectedPackages) { + JSONObject affected = (JSONObject) obj; + JSONObject pkg = (JSONObject) affected.get("package"); + String packageName = (String) pkg.get("name"); + JSONArray versions = affected.get("versions") == null ? new JSONArray() : (JSONArray) affected.get("versions"); + for (Object versionObj : versions) { + String version = versionObj.toString(); + String key = packageName + ":" + version; + if (!aggregatedData.containsKey(key)) { + aggregatedData.put(key, new JSONArray()); + } + aggregatedData.get(key).add(cveObject); + } + } + } + } + System.out.println("Export osv aggregated json"); + JSONObject outputObject = new JSONObject(aggregatedData); + try (FileWriter file = new FileWriter(AGGREGATED_DATA_FILE)) { + file.write(outputObject.toJSONString()); + file.flush(); + } + } catch (IOException | ParseException e) { + e.printStackTrace(); + } + } + + private static boolean downloadOsvDatabase(){ + System.out.println("Download osv dataset"); + // Create folder if not exist + File dir = new File(DATA_PATH); + File rootDir = new File(ROOT_PATH); + if (rootDir.exists()) { + rootDir.delete(); + } + dir.mkdirs(); + try { + URL url = new URL(OSV_DATA_URL); + try (InputStream in = url.openStream(); + ZipInputStream zipIn = new ZipInputStream(in)) { + + ZipEntry entry; + byte[] buffer = new byte[1024]; + + while ((entry = zipIn.getNextEntry()) != null) { + String filePath = DATA_PATH + File.separator + entry.getName(); + if (!entry.isDirectory()) { + try (BufferedOutputStream bos = new BufferedOutputStream(new FileOutputStream(filePath))) { + int read; + while ((read = zipIn.read(buffer)) != -1) { + bos.write(buffer, 0, read); + } + } + } else { + File subDir = new File(filePath); + subDir.mkdir(); + } + + zipIn.closeEntry(); + } + } catch (IOException e) { + e.printStackTrace(); + return false; + } + } catch (MalformedURLException e) { + e.printStackTrace(); + return false; + } + return true; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/Weaver.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/Weaver.java new file mode 100644 index 0000000..632c8d7 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/Weaver.java @@ -0,0 +1,68 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue.*; +import org.neo4j.driver.util.Pair; + +import java.util.HashSet; +import java.util.List; +import java.util.Map; +import java.util.Set; + +public class Weaver { + + public static void fillNode(Map nodeMap, List addedValues){ + String nodeId = (String) nodeMap.get("id"); + String nodeType = ( (List) nodeMap.get("labels")).get(0); + for(AddedValue addedValue : getNodeValuesToAdd(nodeId, nodeType, addedValues)){ + Pair value = addedValue.getValue(); + nodeMap.put(value.key(), value.value()); + } + } + + public static void fillRelationship(Map relationshipMap, List addedValues){ + String relationshipType = (String) relationshipMap.get("type"); + for(AddedValue addedValue : getRelationshipValuesToAdd(relationshipType, addedValues)){ + Pair value = addedValue.getValue(); + relationshipMap.put(value.key(), value.value()); + } + } + + private static Set getNodeValuesToAdd(String nodeId, String nodeType, List addedValues){ + Set set = new HashSet<>(); + // Release vertices + if(nodeType.equals("Release")){ + //Put release added values here + if(addedValues.contains(AddedValueEnum.CVE)){ + set.add(new Cve(nodeId)); + } + if(addedValues.contains(AddedValueEnum.CVE_AGGREGATED)){ + set.add(new CveAggregated(nodeId)); + } + if(addedValues.contains(AddedValueEnum.FRESHNESS)){ + set.add(new Freshness(nodeId)); + } + if(addedValues.contains(AddedValueEnum.FRESHNESS_AGGREGATED)){ + set.add(new FreshnessAggregated(nodeId)); + } + } + // Artifact vertices + if(nodeType.equals("Artifact")){ + //Put artifact added values here + if(addedValues.contains(AddedValueEnum.SPEED)){ + set.add(new Speed(nodeId)); + } + } + return set; + } + + private static Set getRelationshipValuesToAdd(String relationshipType, List addedValues){ + Set set = new HashSet<>(); + if(relationshipType.equals("dependency")){ + //Put dependency added values here + } + if(relationshipType.equals("relationship_AR")){ + //Put relationship_AR added values here + } + return set; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValue.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValue.java new file mode 100644 index 0000000..33c075a --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValue.java @@ -0,0 +1,7 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue; + +import org.neo4j.driver.util.Pair; + +public interface AddedValue { + Pair getValue(); +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValueEnum.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValueEnum.java new file mode 100644 index 0000000..3258017 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/AddedValueEnum.java @@ -0,0 +1,9 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue; + +public enum AddedValueEnum { + CVE, + CVE_AGGREGATED, + FRESHNESS, + FRESHNESS_AGGREGATED, + SPEED +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Cve.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Cve.java new file mode 100644 index 0000000..d97f931 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Cve.java @@ -0,0 +1,34 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.common.ReusedCalculation; +import org.neo4j.driver.util.Pair; + +import java.util.Map; +import java.util.Set; + +public class Cve implements AddedValue{ + private final String gav; + + public Cve(String gav) { + this.gav = gav; + } + + @Override + public Pair getValue() { + return new Pair<>() { + @Override + public String key() { + return "CVE"; + } + + @Override + public Set> value() { + return fillCve(); + } + }; + } + + private Set> fillCve(){ + return ReusedCalculation.getCveFromGav(gav); + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/CveAggregated.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/CveAggregated.java new file mode 100644 index 0000000..2aaf83b --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/CveAggregated.java @@ -0,0 +1,41 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue; + +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.GraphUtils; +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.common.ReusedCalculation; +import org.neo4j.driver.util.Pair; + +import java.util.HashSet; +import java.util.Map; +import java.util.Set; + +public class CveAggregated implements AddedValue{ + private final String gav; + + public CveAggregated(String gav) { + this.gav = gav; + } + + @Override + public Pair getValue() { + return new Pair<>() { + @Override + public String key() { + return "CVE_aggregated"; + } + + @Override + public Set> value() { + return fillAggregatedCve(); + } + }; + } + + private Set> fillAggregatedCve(){ + Set> allCVE = new HashSet<>(); + Set gavToTreat = GraphUtils.getGavAndDependenciesSetWithTransitive(gav, new HashSet<>()); + for(String toTreat : gavToTreat){ + allCVE.addAll(ReusedCalculation.getCveFromGav(toTreat)); + } + return allCVE; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Freshness.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Freshness.java new file mode 100644 index 0000000..802d7d4 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Freshness.java @@ -0,0 +1,33 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue; + +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.common.ReusedCalculation; +import org.neo4j.driver.util.Pair; + +import java.util.Map; + +public class Freshness implements AddedValue{ + private final String gav; + + public Freshness(String gav) { + this.gav = gav; + } + + @Override + public Pair getValue() { + return new Pair<>() { + @Override + public String key() { + return "freshness"; + } + + @Override + public Map value() { + return fillFreshness(); + } + }; + } + + private Map fillFreshness() { + return ReusedCalculation.getFreshnessMapFromGav(gav); + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/FreshnessAggregated.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/FreshnessAggregated.java new file mode 100644 index 0000000..ca8e25e --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/FreshnessAggregated.java @@ -0,0 +1,48 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue; + +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.GraphUtils; +import com.cifre.sap.su.neo4jEcosystemWeaver.weaver.common.ReusedCalculation; +import org.neo4j.driver.util.Pair; + +import java.util.HashMap; +import java.util.HashSet; +import java.util.Map; +import java.util.Set; + +public class FreshnessAggregated implements AddedValue{ + private final String gav; + + public FreshnessAggregated(String gav) { + this.gav = gav; + } + + @Override + public Pair getValue() { + return new Pair<>() { + @Override + public String key() { + return "freshness_aggregated"; + } + + @Override + public Map value() { + return fillAggregatedFreshness(); + } + }; + } + + private Map fillAggregatedFreshness() { + Map aggregatedFreshnessMap = new HashMap<>(); + Set gavToTreat = GraphUtils.getGavAndDependenciesSetWithTransitive(gav, new HashSet<>()); + int totalNumberMissedRelease = 0; + long totalOutdatedTimeInMs = 0; + for(String toTreat : gavToTreat){ + Map freshnessToAdd = ReusedCalculation.getFreshnessMapFromGav(toTreat); + totalNumberMissedRelease += Integer.parseInt(freshnessToAdd.get("numberMissedRelease")); + totalOutdatedTimeInMs += Long.parseLong(freshnessToAdd.get("outdatedTimeInMs")); + } + aggregatedFreshnessMap.put("numberMissedRelease", Integer.toString(totalNumberMissedRelease)); + aggregatedFreshnessMap.put("outdatedTimeInMs", Long.toString(totalOutdatedTimeInMs)); + return aggregatedFreshnessMap; + } +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Speed.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Speed.java new file mode 100644 index 0000000..4485e8d --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/addedValue/Speed.java @@ -0,0 +1,67 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.addedValue; + +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jDriverSingleton; +import org.neo4j.driver.Driver; +import org.neo4j.driver.Record; +import org.neo4j.driver.Result; +import org.neo4j.driver.Session; +import org.neo4j.driver.Value; +import org.neo4j.driver.util.Pair; + +import java.time.Duration; +import java.time.Instant; +import java.util.*; + +public class Speed implements AddedValue { + private final String ga; + + public Speed(String ga) { + this.ga = ga; + } + + @Override + public Pair getValue() { + return new Pair<>() { + @Override + public String key() { + return "speed"; + } + + @Override + public Double value() { + return fillSpeed(); + } + }; + } + + private double fillSpeed(){ + String query = "MATCH (a:Artifact) -[e:relationship_AR]-> (r:Release) " + + "WHERE a.id = '"+ga+"' " + + "RETURN r.timestamp AS timestamp"; + // Get all artifact Releases timestamp + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + TreeSet releasesTimeStampSet = new TreeSet<>(); + try (Session session = driver.session()) { + Result result = session.run(query); + while (result.hasNext()) { + Record record = result.next(); + for (Pair pair : record.fields()) { + releasesTimeStampSet.add(Long.parseLong(pair.value().toString())); + } + } + } + if(releasesTimeStampSet.size() < 2){ + return 0; + } + // Calculate average speed by days + Instant minTimestamp = Instant.ofEpochMilli(releasesTimeStampSet.first()); + Instant maxTimestamp = Instant.ofEpochMilli(releasesTimeStampSet.last()); + long durationDays = Duration.between(minTimestamp, maxTimestamp).toDays(); + if (durationDays == 0) { + return 0; + } else { + return (double) releasesTimeStampSet.size() / durationDays; + } + } + +} diff --git a/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/common/ReusedCalculation.java b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/common/ReusedCalculation.java new file mode 100644 index 0000000..7700bb5 --- /dev/null +++ b/src/main/java/com/cifre/sap/su/neo4jEcosystemWeaver/weaver/common/ReusedCalculation.java @@ -0,0 +1,90 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver.weaver.common; + +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.ApiUtils; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.Neo4jDriverSingleton; +import com.cifre.sap.su.neo4jEcosystemWeaver.utils.OsvDataSingleton; +import org.json.simple.JSONArray; +import org.json.simple.JSONObject; +import org.json.simple.parser.ParseException; +import org.neo4j.driver.*; +import org.neo4j.driver.Record; +import org.neo4j.driver.util.Pair; + +import java.io.IOException; +import java.util.HashMap; +import java.util.HashSet; +import java.util.Map; +import java.util.Set; + +public class ReusedCalculation { + public static Set> getCveFromGav(String gav){ + Set> resultSet = new HashSet<>(); + try { + JSONObject jsonObject = OsvDataSingleton.getDataJsonObject(); + JSONArray cveArray = (JSONArray) jsonObject.get(gav); + if (cveArray != null) { + for (Object vulnerability : cveArray) { + JSONObject vulnerabilityJsonObject = (JSONObject) vulnerability; + Map cveMap = new HashMap(); + cveMap.put("name", (String) vulnerabilityJsonObject.get("name")); + cveMap.put("cwe", (String) vulnerabilityJsonObject.get("cwe_ids")); + cveMap.put("severity", (String) vulnerabilityJsonObject.get("severity")); + resultSet.add(cveMap); + } + } + } catch (IOException | ParseException e) { + e.printStackTrace(); + } + return resultSet; + } + + public static Set> getCveFromApiWithGav(String gav){ + Set> resultSet = new HashSet<>(); + String[] splitedGav = gav.split(":"); + String packageName = splitedGav[0]+":"+splitedGav[1]; + String version = splitedGav[2]; + JSONObject jsonObject = ApiUtils.callWithData("https://api.osv.dev/v1/query", "POST", "{\"version\": \""+version+"\", \"package\": {\"name\": \""+packageName+"\", \"ecosystem\": \"Maven\"}}"); + if (jsonObject != null) { + JSONArray vulnerabilities = (JSONArray) jsonObject.get("vulns"); + if (vulnerabilities != null) { + for (Object vulnerability : vulnerabilities) { + JSONObject vulnerabilityJsonObject = (JSONObject) vulnerability; + String vulnerabilityName = vulnerabilityJsonObject.get("aliases") != null ? (vulnerabilityJsonObject.get("aliases").toString().split("\"]")[0].substring(2)) : ""; + JSONObject detailJsonObject = (JSONObject) vulnerabilityJsonObject.get("database_specific"); + String vulnerabilitySeverity = ""; + String vulnerabilityCwe = ""; + if(detailJsonObject != null){ + vulnerabilitySeverity = detailJsonObject.get("severity") != null ? detailJsonObject.get("severity").toString() : ""; + vulnerabilityCwe = detailJsonObject.get("cwe_ids") != null ? detailJsonObject.get("cwe_ids").toString() : ""; + } + Map cveMap = new HashMap(); + cveMap.put("name", vulnerabilityName.replaceAll("[\"]","")); + cveMap.put("cwe", vulnerabilityCwe.replaceAll("[\"]","")); + cveMap.put("severity", vulnerabilitySeverity.replaceAll("[\"]","")); + resultSet.add(cveMap); + } + } + } + return resultSet; + } + + public static Map getFreshnessMapFromGav(String gav){ + Map freshnessMap = new HashMap<>(); + String query = "MATCH (r1:Release)<-[:relationship_AR]-(:Artifact)-[:relationship_AR]->(r2:Release) " + + "WHERE r1.id = '"+gav+"' AND r2.timestamp > r1.timestamp " + + "WITH r2, r2.timestamp - r1.timestamp AS difference " + + "RETURN count(r2) AS numberMissedRelease, max(difference) AS outdatedTimeInMs"; + Driver driver = Neo4jDriverSingleton.getDriverInstance(); + try (Session session = driver.session()) { + Result result = session.run(query); + while (result.hasNext()) { + Record record = result.next(); + for (Pair pair : record.fields()) { + String value = pair.value().toString().equals("NULL") ? "0" : pair.value().toString(); + freshnessMap.put(pair.key(),value); + } + } + } + return freshnessMap; + } +} diff --git a/src/main/resources/application.properties b/src/main/resources/application.properties new file mode 100644 index 0000000..8b13789 --- /dev/null +++ b/src/main/resources/application.properties @@ -0,0 +1 @@ + diff --git a/src/test/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplicationTests.java b/src/test/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplicationTests.java new file mode 100644 index 0000000..3f771fe --- /dev/null +++ b/src/test/java/com/cifre/sap/su/neo4jEcosystemWeaver/Neo4jEcosystemWeaverApplicationTests.java @@ -0,0 +1,13 @@ +package com.cifre.sap.su.neo4jEcosystemWeaver; + +import org.junit.jupiter.api.Test; +import org.springframework.boot.test.context.SpringBootTest; + +@SpringBootTest +class Neo4jEcosystemWeaverApplicationTests { + + @Test + void contextLoads() { + } + +}