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Welcome to the GenomeView manual. These pages aim to answer any questions you may have as an end-user, a platform-user or as a contributing developer. This documentation is open for anyone to contribute to, just click the edit-button near the top and you can help make this a better resource for everyone. Due to increasing vandalism we were forced to shutdown anonymous editing and account sign-up. If you like an account, please drop a note to [email protected]. Feel free to copy documentation from the old manual to here, there are still some pages that need to be transferred and we're happy with any help you can spare.

User manual

Starting GenomeView Preparing and loading data -- Preloaded data Navigation -- Keyboard short-cuts Visualizations Search for... Manipulating and configuring the views Editing annotations Exporting data and saving changes More functionality with plugins

Getting help

Frequently asked questions I have a problem, help me, please Report a bug or request a feature Supported versions

Platform-user manual

Using GenomeView from the command-line Integration Session files -- Configuration options Communicating with GenomeView Programming with GenomeView Setting up authentication and encryption Making a plugin Integrating GenomeView as an editor Setting up a Genome Explorer repository

Developer manual

These pages are aimed towards contributors to GenomeView and developers who work directly on the GenomeView code. Currently most of this documentation lives on Sourceforge. Unit test example data files