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Format of BraTS data set #14

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aminerLNC opened this issue Aug 16, 2023 · 1 comment
Open

Format of BraTS data set #14

aminerLNC opened this issue Aug 16, 2023 · 1 comment

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@aminerLNC
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Hello,
After working through a few issues, I now have an error regarding the format of the brats dataset:
FileNotFoundError: No such file or no access: '/.......aTS2020_TrainingData/MICCAI_BraTS2020_TrainingData/BraTS20_Training_001/BraTS20_Training_001_flair.nii.gz'

The data is there, 33gb of training data. However, the files are not .gz They are simply in the format "BraTS20_Training_001_flair.nii"

This Brats data was downloaded from https://www.kaggle.com/datasets/awsaf49/brats2020-training-data

Is there a way to specify that the data is not in a .gz, but in the binary format provided by the repository?

@YongpeiZhu
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How do you solve this problem?

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