From 828e8ef41158c7cd615759bc511cbeaf42719852 Mon Sep 17 00:00:00 2001
From: Jesper Friis <jesper.friis@sintef.no>
Date: Tue, 15 Oct 2024 16:55:12 +0200
Subject: [PATCH] Added semdata.yaml

---
 tests/dataset/test_dataset.py |  7 ++--
 tests/input/semdata.yaml      | 72 +++++++++++++++++++++++++++++++++++
 2 files changed, 76 insertions(+), 3 deletions(-)
 create mode 100644 tests/input/semdata.yaml

diff --git a/tests/dataset/test_dataset.py b/tests/dataset/test_dataset.py
index e5aba0c..4bc2e89 100644
--- a/tests/dataset/test_dataset.py
+++ b/tests/dataset/test_dataset.py
@@ -12,8 +12,8 @@
 inputdir = testdir / "input"
 
 
-# if True:
-def test_save_and_load_dataset():
+if True:
+    # def test_save_and_load_dataset():
     """Test save_dataset() and load_dataset()."""
     # pylint: disable=too-many-locals,invalid-name
 
@@ -23,7 +23,8 @@ def test_save_and_load_dataset():
     ts = Triplestore("rdflib")
 
     # Load data documentation
-    datadoc = load_datadoc(inputdir / "datasets.yaml")
+    # datadoc = load_datadoc(inputdir / "datasets.yaml")
+    datadoc = load_datadoc(inputdir / "semdata.yaml")
     assert isinstance(datadoc, dict)
     assert "@context" in datadoc
 
diff --git a/tests/input/semdata.yaml b/tests/input/semdata.yaml
new file mode 100644
index 0000000..9456ce0
--- /dev/null
+++ b/tests/input/semdata.yaml
@@ -0,0 +1,72 @@
+---
+# This extends the list of prefixes that are already defined in the context
+prefixes:
+  sem: "https://w3id.com/emmo/domain/sem/0.1#"
+  semdata: "https://he-matchmaker.eu/data/sem/"
+  sample: "https://he-matchmaker.eu/sample/"
+  mat: "https://he-matchmaker.eu/material/"
+  dm: "http://onto-ns.com/meta/characterisation/0.1/SEMImage#"
+  parser: "http://sintef.no/dlite/parser#"
+
+# List of documented datasets
+datasets:
+  - "@id": "semdata:SEM_cement_batch2/77600-23-001/77600-23-001_5kV_400x_m001"
+    "@type": "https://w3id.com/emmo/domain/sem/0.1#SEMImage"
+    title: SEM image of cement
+    description: |
+      Back-scattered SEM image of cement sample 77600 from Heidelberg,
+      polished with 1 µm diamond compound.
+    creator: Sigurd Wenner
+    contactPoint: "Sigurd Wenner <Sigurd.Wenner@sintef.no>"
+    inSeries: "semdata:SEM_cement_batch2/77600-23-001"
+
+    datamodel: http://onto-ns.com/meta/characterisation/0.1/SEMImage
+    mappingURL: https://raw.githubusercontent.com/HEU-MatCHMaker/DataDocumentation/refs/heads/master/SEM/datamodels/SEMImage.ttl
+
+    # Contextual documentation of the dataset
+    statements:
+      - ["@id", "sem:fromSample", "sample:SEM_cement_batch2/77600-23-001"]
+      - ["@id", "emmo:isDescriptionOf", "mat:concrete1"]
+
+    distribution:
+      downloadURL: "file://SEM_cement_batch2/77600-23-001/77600-23-001_5kV_400x_m001.tif"
+      mediaType: image/tiff
+      parser: "parser:sem_hitachi"
+
+
+  - "@id": "semdata:SEM_cement_batch2/77600-23-001"
+    "@type": "https://w3id.com/emmo/domain/sem/0.1#SEMImageSeries"
+    title: Series of SEM image of cement sample 77600
+    description: Back-scattered SEM image of cement sample 77600, polished with 1 µm diamond compound.
+    creator: Sigurd Wenner
+    contactPoint: "Sigurd Wenner <Sigurd.Wenner@sintef.no>"
+    inSeries: "semdata:SEM_cement_batch2"
+
+    distribution:
+      downloadURL: "file://SEM_cement_batch2/77600-23-001"
+      mediaType: inode/directory
+
+
+  - "@id": "semdata:SEM_cement_batch2"
+    "@type": "https://w3id.com/emmo/domain/sem/0.1#SEMImageSeries"
+    title: Series of SEM images of cement batch2
+    description:  ...
+    creator: Sigurd Wenner
+    contactPoint: "Sigurd Wenner <Sigurd.Wenner@sintef.no>"
+
+    distribution:
+      downloadURL: "file://SEM_cement_batch2"
+      mediaType: inode/directory
+
+
+  - "@id": "sample:SEM_cement_batch2/77600-23-001"
+    "@type": "chameo:Sample"
+    title:
+
+
+parsers:
+  - "@id": "parser:sem_hitachi"
+    "@type": "oteio:Parser"
+    parserType: application/vnd.dlite-parse
+    configuration:
+      driver: hitachi