- Deep refactoring of Freq_meth_calculate to Aggregate
- Major doc update including doc folders reorganisation
- Implement autodoc from docstring
- Fix and test CLI
- General improvement of logging message output
- Implement fancy color logger
- Add position tracking within intervals
- Add Comp_Report module to generate HTML reports of significant candidates
- Add tabular text reports to Comp_report
- Add (default) option to write out all the intervals in Meth_Comp with reasons why excluded or included in DM analysis
- Improve Comp_report summary table and include new fields from Meth_Comp
- Tidy output folder structure for reports generated by meth_report
- Add Chromosome ideogram plot to summary report
- A fasta reference is now required to run Comp_Report
- Speed improvement to Comp_report
- Add interactive API to Comp_report
- Add ability to export static plots using orca
- Switch from orca to kaleido for static export
- Export summary of intervals in table file for all intervals and not just for top hits
- Add new plot for distance between CpG islands and closest tss