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problems with building kraken and kraken2 databases #159

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itiago opened this issue Jun 14, 2022 · 1 comment
Open

problems with building kraken and kraken2 databases #159

itiago opened this issue Jun 14, 2022 · 1 comment

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@itiago
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itiago commented Jun 14, 2022

Hi, I'm trying to download and build both databases, wanted to use only kraken2 but could do it so tried kraken and got the same error, bellow: can anyone help? thank you

(metawrap-env) deepbio@Kraken2:~/Documents/Cogumelos_Amanita_Genomes$ kraken2-build --standard --threads 20 --db /home/deepbio/Documents/Programs/metaWrap_databases/Kraken2_db
Downloading taxonomy tree data... done.
Untarring taxonomy tree data... done.
rsync_from_ncbi.pl: unexpected FTP path (new server?) for https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/762/265/GCF_000762265.1_ASM76226v1

@gubrins
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gubrins commented Dec 1, 2022

Heys, I am having the exact same problem, did you solve it?

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