From 2cb8882fe3c98b88233b229e75ab439eb6a4673c Mon Sep 17 00:00:00 2001 From: Martijn Visser Date: Tue, 14 Nov 2023 17:06:46 +0100 Subject: [PATCH] Set up Quarto website (#37) Still very minimal, but after this we can start filling it in, and including the notebooks to the documentation. Does not yet include the edits to thegoodcloud.md from #36. Probably that file needs some extra tweaks anyway to make it render nicely. --- .github/workflows/docs.yml | 39 + .github/workflows/python_lint.yml | 1 - .github/workflows/python_tests.yml | 1 - docs/.gitignore | 3 + docs/_quarto.yml | 41 + docs/assets/styles.css | 1 + docs/{thegoodcloud.md => cloudstorage.qmd} | 22 + docs/index.qmd | 6 + pixi.lock | 19603 +++++++++++-------- pixi.toml | 17 +- 10 files changed, 11781 insertions(+), 7953 deletions(-) create mode 100644 .github/workflows/docs.yml create mode 100644 docs/.gitignore create mode 100644 docs/_quarto.yml create mode 100644 docs/assets/styles.css rename docs/{thegoodcloud.md => cloudstorage.qmd} (67%) create mode 100644 docs/index.qmd diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml new file mode 100644 index 0000000..9440e81 --- /dev/null +++ b/.github/workflows/docs.yml @@ -0,0 +1,39 @@ +name: Docs +on: + push: + branches: [main] + paths-ignore: [".teamcity/**"] + pull_request: + merge_group: +concurrency: + group: ${{ github.workflow }}-${{ github.ref }} + cancel-in-progress: true +jobs: + publish: + name: Docs + runs-on: ubuntu-latest + permissions: + contents: write + steps: + - uses: actions/checkout@v4 + + - uses: prefix-dev/setup-pixi@v0.4.0 + with: + pixi-version: "latest" + - name: Prepare pixi + run: pixi run install-without-pre-commit + + - name: Check Quarto installation and all engines + run: pixi run quarto-check + + - name: Render Quarto Project + run: pixi run quarto-render + + - name: Publish Quarto Project + if: github.ref == 'refs/heads/main' + uses: peaceiris/actions-gh-pages@v3 + with: + github_token: ${{ secrets.GITHUB_TOKEN }} + publish_dir: ./docs/_site + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} diff --git a/.github/workflows/python_lint.yml b/.github/workflows/python_lint.yml index 47a734c..9606aae 100644 --- a/.github/workflows/python_lint.yml +++ b/.github/workflows/python_lint.yml @@ -19,7 +19,6 @@ jobs: - uses: prefix-dev/setup-pixi@v0.4.0 with: pixi-version: "latest" - cache: true - name: Prepare pixi run: pixi run install-without-pre-commit - name: Run mypy on hydamo diff --git a/.github/workflows/python_tests.yml b/.github/workflows/python_tests.yml index d052d1c..412a5ed 100644 --- a/.github/workflows/python_tests.yml +++ b/.github/workflows/python_tests.yml @@ -26,7 +26,6 @@ jobs: - uses: prefix-dev/setup-pixi@v0.4.0 with: pixi-version: "latest" - cache: true - name: Prepare pixi run: pixi run install-without-pre-commit diff --git a/docs/.gitignore b/docs/.gitignore new file mode 100644 index 0000000..f72057f --- /dev/null +++ b/docs/.gitignore @@ -0,0 +1,3 @@ +/.quarto/ +/_site/ +/reference/ diff --git a/docs/_quarto.yml b/docs/_quarto.yml new file mode 100644 index 0000000..eb7d3df --- /dev/null +++ b/docs/_quarto.yml @@ -0,0 +1,41 @@ +project: + type: website + +website: + title: "Ribasim-NL" + navbar: + left: + - reference/index.qmd + - cloudstorage.qmd + right: + - icon: github + href: https://github.com/Deltares/Ribasim-NL + aria-label: GitHub + +format: + html: + theme: cosmo + css: styles.css + toc: true + +quartodoc: + style: pkgdown + dir: reference + title: API Reference + package: null + sections: + - title: HyDAMO + package: hydamo + desc: The HyDAMO class represents the HyDAMO data model. + contents: + - HyDAMO + - ExtendedGeoDataFrame + - find_nearest_branch + - possibly_intersecting + - add_styles_to_geopackage + - read_style + - title: Ribasim-NL + package: ribasim_nl + desc: Ribasim-NL code. + contents: + - CloudStorage diff --git a/docs/assets/styles.css b/docs/assets/styles.css new file mode 100644 index 0000000..2ddf50c --- /dev/null +++ b/docs/assets/styles.css @@ -0,0 +1 @@ +/* css styles */ diff --git a/docs/thegoodcloud.md b/docs/cloudstorage.qmd similarity index 67% rename from docs/thegoodcloud.md rename to docs/cloudstorage.qmd index ac0c6df..e393f32 100644 --- a/docs/thegoodcloud.md +++ b/docs/cloudstorage.qmd @@ -1,3 +1,7 @@ +--- +title: "Cloud storage" +--- + # Connecting The Good Cloud ## OS environment variables @@ -21,6 +25,16 @@ And else cloud_storage = CloudStorage(password=password, data_dir=my_data_dir) ``` +## Download sources (basisgegevens) +Find all sources + +``` +# find all sources, `PBL_watertypenkaart` +sources = cloud_storage.source_data +# download, `PBL_watertypenkaart` +cloud.download_basisgegevens(bronnen=["PBL_watertypenkaart"]) +``` + ## Find water authorities To find available water authorities: ``` @@ -39,3 +53,11 @@ cloud_storage.download_verwerkt(authority) # to download all cloud_storage.download_all(authority) +``` + +## Upload manipulated data (aangeleverd) +``` +authority = "Rijkswaterstaat" +# upload local `aangeleverd` directory to cloud-storage +cloud_storage.upload_aangeleverd(authority, overwrite=True) +``` diff --git a/docs/index.qmd b/docs/index.qmd new file mode 100644 index 0000000..b4f396f --- /dev/null +++ b/docs/index.qmd @@ -0,0 +1,6 @@ +--- +title: "Ribasim-NL" +--- + +Ribasim-NL facilitates Ribasim water resources modeling in the Netherlands. +For more informantion on Ribasim itself please see the [Ribasim documentation](https://deltares.github.io/Ribasim/). diff --git a/pixi.lock b/pixi.lock index 5d20dcc..cc9d134 100644 --- a/pixi.lock +++ b/pixi.lock @@ -16,17 +16,16 @@ metadata: inputs_metadata: null custom_metadata: null package: -- name: _libgcc_mutex +- platform: linux-64 + name: _libgcc_mutex version: '0.1' + category: main manager: conda - 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platform: linux-64 dependencies: - click: '>=4.0' - python: <4.0 + - click >=4.0 + - python <4.0 url: https://conda.anaconda.org/conda-forge/noarch/cligj-0.7.2-pyhd8ed1ab_1.tar.bz2 hash: md5: a29b7c141d6b2de4bb67788a5f107734 sha256: 97bd58f0cfcff56a0bcda101e26f7d936625599325beba3e3a1fa512dd7fc174 - optional: false - category: main build: pyhd8ed1ab_1 arch: x86_64 subdir: linux-64 @@ -2480,19 +3096,18 @@ package: noarch: python size: 10255 timestamp: 1633637895378 -- name: cligj +- platform: osx-64 + name: cligj version: 0.7.2 + category: main manager: conda - platform: osx-64 dependencies: - click: '>=4.0' - python: <4.0 + - click >=4.0 + - python <4.0 url: https://conda.anaconda.org/conda-forge/noarch/cligj-0.7.2-pyhd8ed1ab_1.tar.bz2 hash: md5: a29b7c141d6b2de4bb67788a5f107734 sha256: 97bd58f0cfcff56a0bcda101e26f7d936625599325beba3e3a1fa512dd7fc174 - optional: false - category: main build: pyhd8ed1ab_1 arch: x86_64 subdir: osx-64 @@ -2502,19 +3117,18 @@ package: noarch: python size: 10255 timestamp: 1633637895378 -- name: cligj +- platform: win-64 + name: cligj version: 0.7.2 + category: main manager: conda - 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platform: osx-64 dependencies: - python: '>=3.7' + - python >=3.7 url: https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_0.tar.bz2 hash: md5: 3faab06a954c2a04039983f2c4a50d99 sha256: 2c1b2e9755ce3102bca8d69e8f26e4f087ece73f50418186aee7c74bef8e1698 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: osx-64 @@ -2566,18 +3178,17 @@ package: noarch: python size: 25170 timestamp: 1666700778190 -- name: colorama +- platform: win-64 + name: colorama version: 0.4.6 + category: main manager: conda - platform: win-64 dependencies: - python: '>=3.7' + - python >=3.7 url: https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_0.tar.bz2 hash: md5: 3faab06a954c2a04039983f2c4a50d99 sha256: 2c1b2e9755ce3102bca8d69e8f26e4f087ece73f50418186aee7c74bef8e1698 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: win-64 @@ -2587,19 +3198,18 @@ package: noarch: python size: 25170 timestamp: 1666700778190 -- name: comm +- platform: linux-64 + name: comm version: 0.1.4 + category: main manager: conda - 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platform: win-64 dependencies: - python: '>=3.6' - traitlets: '>=5.3' + - python >=3.6 + - traitlets >=5.3 url: https://conda.anaconda.org/conda-forge/noarch/comm-0.1.4-pyhd8ed1ab_0.conda hash: md5: c8eaca39e2b6abae1fc96acc929ae939 sha256: 11057745946a95ee7cc4c98900a60c7362266a4cb28bc97d96cd88e3056eb701 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: win-64 @@ -2653,22 +3261,21 @@ package: noarch: python size: 11682 timestamp: 1691045097208 -- name: contourpy +- platform: linux-64 + name: contourpy version: 1.2.0 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=12' - libstdcxx-ng: '>=12' - numpy: '>=1.20,<2' - python: '>=3.11,<3.12.0a0' - python_abi: 3.11.* *_cp311 + - libgcc-ng >=12 + - libstdcxx-ng >=12 + - numpy >=1.20,<2 + - python >=3.11,<3.12.0a0 + - python_abi 3.11.* *_cp311 url: https://conda.anaconda.org/conda-forge/linux-64/contourpy-1.2.0-py311h9547e67_0.conda hash: md5: 40828c5b36ef52433e21f89943e09f33 sha256: 2c76e2a970b74eef92ef9460aa705dbdc506dd59b7382bfbedce39d9c189d7f4 - 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optional: false - category: main build: hab24e00_0 arch: x86_64 subdir: win-64 @@ -3627,17 +4538,16 @@ package: noarch: generic size: 397370 timestamp: 1566932522327 -- name: font-ttf-inconsolata +- platform: linux-64 + name: font-ttf-inconsolata version: '3.000' + category: main manager: conda - platform: linux-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2 hash: md5: 34893075a5c9e55cdafac56607368fc6 sha256: c52a29fdac682c20d252facc50f01e7c2e7ceac52aa9817aaf0bb83f7559ec5c - optional: false - category: main build: h77eed37_0 arch: x86_64 subdir: linux-64 @@ -3647,17 +4557,16 @@ package: noarch: generic size: 96530 timestamp: 1620479909603 -- name: font-ttf-inconsolata +- platform: osx-64 + name: font-ttf-inconsolata version: '3.000' + category: main manager: conda - platform: osx-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2 hash: md5: 34893075a5c9e55cdafac56607368fc6 sha256: c52a29fdac682c20d252facc50f01e7c2e7ceac52aa9817aaf0bb83f7559ec5c - optional: false - category: main build: h77eed37_0 arch: x86_64 subdir: osx-64 @@ -3667,17 +4576,16 @@ package: noarch: generic size: 96530 timestamp: 1620479909603 -- name: font-ttf-inconsolata +- platform: win-64 + name: font-ttf-inconsolata version: '3.000' + category: main manager: conda - platform: win-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2 hash: md5: 34893075a5c9e55cdafac56607368fc6 sha256: c52a29fdac682c20d252facc50f01e7c2e7ceac52aa9817aaf0bb83f7559ec5c - optional: false - category: main build: h77eed37_0 arch: x86_64 subdir: win-64 @@ -3687,17 +4595,16 @@ package: noarch: generic size: 96530 timestamp: 1620479909603 -- name: font-ttf-source-code-pro +- platform: linux-64 + name: font-ttf-source-code-pro version: '2.038' + category: main manager: conda - platform: linux-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2 hash: md5: 4d59c254e01d9cde7957100457e2d5fb sha256: 00925c8c055a2275614b4d983e1df637245e19058d79fc7dd1a93b8d9fb4b139 - optional: false - category: main build: h77eed37_0 arch: x86_64 subdir: linux-64 @@ -3707,17 +4614,16 @@ package: noarch: generic size: 700814 timestamp: 1620479612257 -- name: font-ttf-source-code-pro +- platform: osx-64 + name: font-ttf-source-code-pro version: '2.038' + category: main manager: conda - platform: osx-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2 hash: md5: 4d59c254e01d9cde7957100457e2d5fb sha256: 00925c8c055a2275614b4d983e1df637245e19058d79fc7dd1a93b8d9fb4b139 - optional: false - category: main build: h77eed37_0 arch: x86_64 subdir: osx-64 @@ -3727,17 +4633,16 @@ package: noarch: generic size: 700814 timestamp: 1620479612257 -- name: font-ttf-source-code-pro +- platform: win-64 + name: font-ttf-source-code-pro version: '2.038' + category: main manager: conda - platform: win-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2 hash: md5: 4d59c254e01d9cde7957100457e2d5fb sha256: 00925c8c055a2275614b4d983e1df637245e19058d79fc7dd1a93b8d9fb4b139 - optional: false - category: main build: h77eed37_0 arch: x86_64 subdir: win-64 @@ -3747,17 +4652,16 @@ package: noarch: generic size: 700814 timestamp: 1620479612257 -- name: font-ttf-ubuntu +- platform: linux-64 + name: font-ttf-ubuntu version: '0.83' + category: main manager: conda - platform: linux-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2 hash: md5: 19410c3df09dfb12d1206132a1d357c5 sha256: 470d5db54102bd51dbb0c5990324a2f4a0bc976faa493b22193338adb9882e2e - optional: false - category: main build: hab24e00_0 arch: x86_64 subdir: linux-64 @@ -3767,17 +4671,16 @@ package: noarch: generic size: 1961279 timestamp: 1566932680646 -- name: font-ttf-ubuntu +- platform: osx-64 + name: font-ttf-ubuntu version: '0.83' + category: main manager: conda - platform: osx-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2 hash: md5: 19410c3df09dfb12d1206132a1d357c5 sha256: 470d5db54102bd51dbb0c5990324a2f4a0bc976faa493b22193338adb9882e2e - optional: false - category: main build: hab24e00_0 arch: x86_64 subdir: osx-64 @@ -3787,17 +4690,16 @@ package: noarch: generic size: 1961279 timestamp: 1566932680646 -- name: font-ttf-ubuntu +- platform: win-64 + name: font-ttf-ubuntu version: '0.83' + category: main manager: conda - platform: win-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2 hash: md5: 19410c3df09dfb12d1206132a1d357c5 sha256: 470d5db54102bd51dbb0c5990324a2f4a0bc976faa493b22193338adb9882e2e - optional: false - category: main build: hab24e00_0 arch: x86_64 subdir: win-64 @@ -3807,22 +4709,21 @@ package: noarch: generic size: 1961279 timestamp: 1566932680646 -- name: fontconfig +- platform: linux-64 + name: fontconfig version: 2.14.2 + category: main manager: conda - platform: linux-64 dependencies: - expat: '>=2.5.0,<3.0a0' - freetype: '>=2.12.1,<3.0a0' - libgcc-ng: '>=12' - libuuid: '>=2.32.1,<3.0a0' - libzlib: '>=1.2.13,<1.3.0a0' + - 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platform: linux-64 dependencies: - fonts-conda-forge: '*' + - fonts-conda-forge url: https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2 hash: md5: fee5683a3f04bd15cbd8318b096a27ab sha256: a997f2f1921bb9c9d76e6fa2f6b408b7fa549edd349a77639c9fe7a23ea93e61 - optional: false - category: main build: '0' arch: x86_64 subdir: linux-64 @@ -3900,18 +4798,17 @@ package: noarch: generic size: 3667 timestamp: 1566974674465 -- name: fonts-conda-ecosystem +- platform: osx-64 + name: fonts-conda-ecosystem version: '1' + category: main manager: conda - platform: osx-64 dependencies: - fonts-conda-forge: '*' + - fonts-conda-forge url: https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2 hash: md5: fee5683a3f04bd15cbd8318b096a27ab sha256: a997f2f1921bb9c9d76e6fa2f6b408b7fa549edd349a77639c9fe7a23ea93e61 - optional: false - category: main build: '0' arch: x86_64 subdir: osx-64 @@ -3921,18 +4818,17 @@ package: noarch: generic size: 3667 timestamp: 1566974674465 -- name: fonts-conda-ecosystem +- platform: win-64 + name: fonts-conda-ecosystem version: '1' + category: main manager: conda - platform: win-64 dependencies: - fonts-conda-forge: '*' + - fonts-conda-forge url: https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2 hash: md5: fee5683a3f04bd15cbd8318b096a27ab sha256: a997f2f1921bb9c9d76e6fa2f6b408b7fa549edd349a77639c9fe7a23ea93e61 - optional: false - category: main build: '0' arch: x86_64 subdir: win-64 @@ -3942,21 +4838,20 @@ package: noarch: generic size: 3667 timestamp: 1566974674465 -- name: fonts-conda-forge +- platform: linux-64 + name: fonts-conda-forge version: '1' + category: main manager: conda - platform: linux-64 dependencies: - font-ttf-dejavu-sans-mono: '*' - font-ttf-inconsolata: '*' - font-ttf-source-code-pro: '*' - font-ttf-ubuntu: '*' + - font-ttf-dejavu-sans-mono + - font-ttf-inconsolata + - font-ttf-source-code-pro + - font-ttf-ubuntu url: https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2 hash: md5: f766549260d6815b0c52253f1fb1bb29 sha256: 53f23a3319466053818540bcdf2091f253cbdbab1e0e9ae7b9e509dcaa2a5e38 - 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platform: win-64 dependencies: - font-ttf-dejavu-sans-mono: '*' - font-ttf-inconsolata: '*' - font-ttf-source-code-pro: '*' - font-ttf-ubuntu: '*' + - font-ttf-dejavu-sans-mono + - font-ttf-inconsolata + - font-ttf-source-code-pro + - font-ttf-ubuntu url: https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2 hash: md5: f766549260d6815b0c52253f1fb1bb29 sha256: 53f23a3319466053818540bcdf2091f253cbdbab1e0e9ae7b9e509dcaa2a5e38 - optional: false - category: main build: '0' arch: x86_64 subdir: win-64 @@ -4014,22 +4907,21 @@ package: noarch: generic size: 4102 timestamp: 1566932280397 -- name: fonttools +- platform: linux-64 + name: fonttools version: 4.44.0 + category: main manager: conda - platform: linux-64 dependencies: - brotli: '*' - libgcc-ng: '>=12' - munkres: '*' - python: '>=3.11,<3.12.0a0' - python_abi: 3.11.* *_cp311 + - brotli + - libgcc-ng >=12 + - munkres + - python >=3.11,<3.12.0a0 + - python_abi 3.11.* *_cp311 url: https://conda.anaconda.org/conda-forge/linux-64/fonttools-4.44.0-py311h459d7ec_0.conda hash: md5: f12f4d7361178f94df1052d6b63fd868 sha256: d1a0023bc0a35b9e3f9be10b6fe5f305a0e14fe4e956d688304413f4234ae286 - 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platform: linux-64 dependencies: - libgcc-ng: '>=12' + - libgcc-ng >=12 url: https://conda.anaconda.org/conda-forge/linux-64/libnuma-2.0.16-h0b41bf4_1.conda hash: md5: 28bfe2cb11357ccc5be21101a6b7ce86 sha256: 814a50cba215548ec3ebfb53033ffb9b3b070b2966570ff44910b8d9ba1c359d - optional: false - category: main build: h0b41bf4_1 arch: x86_64 subdir: linux-64 @@ -9530,18 +11453,17 @@ package: license: LGPL-2.1-only size: 41107 timestamp: 1676004391774 -- name: libogg +- platform: linux-64 + name: libogg version: 1.3.4 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=9.3.0' + - libgcc-ng >=9.3.0 url: https://conda.anaconda.org/conda-forge/linux-64/libogg-1.3.4-h7f98852_1.tar.bz2 hash: md5: 6e8cc2173440d77708196c5b93771680 sha256: b88afeb30620b11bed54dac4295aa57252321446ba4e6babd7dce4b9ffde9b25 - optional: false - category: main build: h7f98852_1 arch: x86_64 subdir: linux-64 @@ -9550,19 +11472,18 @@ package: license_family: BSD size: 210550 timestamp: 1610382007814 -- name: libogg +- platform: win-64 + name: libogg version: 1.3.4 + category: main manager: conda - platform: win-64 dependencies: - vc: '>=14.1,<15.0a0' - vs2015_runtime: '>=14.16.27012' + - vc >=14.1,<15.0a0 + - vs2015_runtime >=14.16.27012 url: https://conda.anaconda.org/conda-forge/win-64/libogg-1.3.4-h8ffe710_1.tar.bz2 hash: md5: 04286d905a0dcb7f7d4a12bdfe02516d sha256: ef20f04ad2121a07e074b34bfc211587df18180e680963f5c02c54d1951b9ee6 - optional: false - category: main build: h8ffe710_1 arch: x86_64 subdir: win-64 @@ -9571,20 +11492,19 @@ package: license_family: BSD size: 35187 timestamp: 1610382533961 -- name: libopenblas +- platform: linux-64 + name: libopenblas version: 0.3.24 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=12' - libgfortran-ng: '*' - libgfortran5: '>=12.3.0' + - libgcc-ng >=12 + - libgfortran-ng + - libgfortran5 >=12.3.0 url: https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.24-pthreads_h413a1c8_0.conda hash: md5: 6e4ef6ca28655124dcde9bd500e44c32 sha256: c8e080ae4d57506238023e98869928ae93564e6407ef5b0c4d3a337e8c2b7662 - 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platform: win-64 dependencies: - msys2-conda-epoch: ==20160418 + - msys2-conda-epoch ==20160418 url: https://conda.anaconda.org/conda-forge/win-64/m2w64-gmp-6.1.0-2.tar.bz2 hash: md5: 53a1c73e1e3d185516d7e3af177596d9 sha256: 7e3cd95f554660de45f8323fca359e904e8d203efaf07a4d311e46d611481ed1 - optional: false - category: main build: '2' arch: x86_64 subdir: win-64 @@ -11325,18 +13181,17 @@ package: license: LGPL3 size: 743501 timestamp: 1608163782057 -- name: m2w64-libwinpthread-git +- platform: win-64 + name: m2w64-libwinpthread-git version: 5.0.0.4634.697f757 + category: main manager: conda - platform: win-64 dependencies: - msys2-conda-epoch: ==20160418 + - msys2-conda-epoch ==20160418 url: https://conda.anaconda.org/conda-forge/win-64/m2w64-libwinpthread-git-5.0.0.4634.697f757-2.tar.bz2 hash: md5: 774130a326dee16f1ceb05cc687ee4f0 sha256: f63a09b2cae7defae0480f1740015d6235f1861afa6fe2e2d3e10bd0d1314ee0 - optional: false - category: main build: '2' arch: x86_64 subdir: win-64 @@ -11344,23 +13199,22 @@ package: license: MIT, BSD size: 31928 timestamp: 1608166099896 -- name: mapclassify +- platform: linux-64 + name: mapclassify version: 2.6.1 + category: main manager: conda - platform: linux-64 dependencies: - networkx: '>=2.7' - numpy: '>=1.23' - pandas: '>=1.4,!=1.5.0' - python: '>=3.9' - scikit-learn: '>=1.0' - scipy: '>=1.8' + - networkx >=2.7 + - numpy >=1.23 + - pandas >=1.4,!=1.5.0 + - python >=3.9 + - scikit-learn >=1.0 + - scipy >=1.8 url: https://conda.anaconda.org/conda-forge/noarch/mapclassify-2.6.1-pyhd8ed1ab_0.conda hash: md5: 6aceae1ad4f16cf7b73ee04189947f98 sha256: 204ab8b242229d422b33cfec07ea61cefa8bd22375a16658afbabaafce031d64 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: linux-64 @@ -11370,23 +13224,22 @@ package: noarch: python size: 38684 timestamp: 1696563711967 -- name: mapclassify +- platform: osx-64 + name: mapclassify version: 2.6.1 + category: main manager: conda - platform: osx-64 dependencies: - networkx: '>=2.7' - numpy: '>=1.23' - pandas: '>=1.4,!=1.5.0' - python: '>=3.9' - scikit-learn: '>=1.0' - scipy: '>=1.8' + - networkx >=2.7 + - numpy >=1.23 + - pandas >=1.4,!=1.5.0 + - python >=3.9 + - scikit-learn >=1.0 + - 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platform: linux-64 dependencies: - libgcc-ng: '>=12' - python: '>=3.11,<3.12.0a0' - python_abi: 3.11.* *_cp311 + - libgcc-ng >=12 + - python >=3.11,<3.12.0a0 + - python_abi 3.11.* *_cp311 url: https://conda.anaconda.org/conda-forge/linux-64/markupsafe-2.1.3-py311h459d7ec_1.conda hash: md5: 71120b5155a0c500826cf81536721a15 sha256: e1a9930f35e39bf65bc293e24160b83ebf9f800f02749f65358e1c04882ee6b0 - optional: false - category: main build: py311h459d7ec_1 arch: x86_64 subdir: linux-64 @@ -11446,19 +13297,18 @@ package: license_family: BSD size: 27174 timestamp: 1695367575909 -- name: markupsafe +- platform: osx-64 + name: markupsafe version: 2.1.3 + category: main manager: conda - platform: osx-64 dependencies: - python: '>=3.11,<3.12.0a0' - python_abi: 3.11.* *_cp311 + - python >=3.11,<3.12.0a0 + - python_abi 3.11.* *_cp311 url: https://conda.anaconda.org/conda-forge/osx-64/markupsafe-2.1.3-py311h2725bcf_1.conda hash: md5: 52ee86f482b552e547e2b1d6c01adf55 sha256: 5a8f8caa89eeba6ea6e9e96d3e7c109b675bc3c6ed4b109b8931757da2411d48 - 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platform: linux-64 dependencies: - libgcc-ng: '>=9.3.0' + - libgcc-ng >=9.3.0 url: https://conda.anaconda.org/conda-forge/linux-64/xorg-xf86vidmodeproto-2.3.1-h7f98852_1002.tar.bz2 hash: md5: 3ceea9668625c18f19530de98b15d5b0 sha256: 43398aeacad5b8753b7a1c12cb6bca36124e0c842330372635879c350c430791 - optional: false - category: main build: h7f98852_1002 arch: x86_64 subdir: linux-64 @@ -19659,18 +23388,17 @@ package: license_family: MIT size: 23875 timestamp: 1620067286978 -- name: xorg-xproto +- platform: linux-64 + name: xorg-xproto version: 7.0.31 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=9.3.0' + - libgcc-ng >=9.3.0 url: https://conda.anaconda.org/conda-forge/linux-64/xorg-xproto-7.0.31-h7f98852_1007.tar.bz2 hash: md5: b4a4381d54784606820704f7b5f05a15 sha256: f197bb742a17c78234c24605ad1fe2d88b1d25f332b75d73e5ba8cf8fbc2a10d - optional: false - category: main build: h7f98852_1007 arch: x86_64 subdir: linux-64 @@ -19679,18 +23407,17 @@ package: license_family: MIT size: 74922 timestamp: 1607291557628 -- name: xyzservices +- platform: linux-64 + name: xyzservices version: 2023.10.1 + category: main manager: conda - platform: linux-64 dependencies: - python: '>=3.8' + - python >=3.8 url: https://conda.anaconda.org/conda-forge/noarch/xyzservices-2023.10.1-pyhd8ed1ab_0.conda hash: md5: 1e0d85c0e2fef9539218da185b285f54 sha256: da655e2e0a742fddefeeaf2dd828b62a1820a3755d13341e1a555a10fcb9cf81 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: linux-64 @@ -19700,18 +23427,17 @@ package: noarch: python size: 36184 timestamp: 1698325478381 -- name: xyzservices +- platform: osx-64 + name: xyzservices version: 2023.10.1 + category: main manager: conda - platform: osx-64 dependencies: - python: '>=3.8' + - python >=3.8 url: https://conda.anaconda.org/conda-forge/noarch/xyzservices-2023.10.1-pyhd8ed1ab_0.conda hash: md5: 1e0d85c0e2fef9539218da185b285f54 sha256: da655e2e0a742fddefeeaf2dd828b62a1820a3755d13341e1a555a10fcb9cf81 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: osx-64 @@ -19721,18 +23447,17 @@ package: noarch: python size: 36184 timestamp: 1698325478381 -- name: xyzservices +- platform: win-64 + name: xyzservices version: 2023.10.1 + category: main manager: conda - platform: win-64 dependencies: - python: '>=3.8' + - python >=3.8 url: https://conda.anaconda.org/conda-forge/noarch/xyzservices-2023.10.1-pyhd8ed1ab_0.conda hash: md5: 1e0d85c0e2fef9539218da185b285f54 sha256: da655e2e0a742fddefeeaf2dd828b62a1820a3755d13341e1a555a10fcb9cf81 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: win-64 @@ -19742,18 +23467,17 @@ package: noarch: python size: 36184 timestamp: 1698325478381 -- name: xz +- platform: linux-64 + name: xz version: 5.2.6 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=12' + - libgcc-ng >=12 url: https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2 hash: md5: 2161070d867d1b1204ea749c8eec4ef0 sha256: 03a6d28ded42af8a347345f82f3eebdd6807a08526d47899a42d62d319609162 - optional: false - category: main build: h166bdaf_0 arch: x86_64 subdir: linux-64 @@ -19761,17 +23485,16 @@ package: license: LGPL-2.1 and GPL-2.0 size: 418368 timestamp: 1660346797927 -- name: xz +- platform: osx-64 + name: xz version: 5.2.6 + category: main manager: conda - platform: osx-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/osx-64/xz-5.2.6-h775f41a_0.tar.bz2 hash: md5: a72f9d4ea13d55d745ff1ed594747f10 sha256: eb09823f34cc2dd663c0ec4ab13f246f45dcd52e5b8c47b9864361de5204a1c8 - optional: false - category: main build: h775f41a_0 arch: x86_64 subdir: osx-64 @@ -19779,19 +23502,18 @@ package: license: LGPL-2.1 and GPL-2.0 size: 238119 timestamp: 1660346964847 -- name: xz +- platform: win-64 + name: xz version: 5.2.6 + category: main manager: conda - platform: win-64 dependencies: - vc: '>=14.1,<15' - vs2015_runtime: '>=14.16.27033' + - vc >=14.1,<15 + - vs2015_runtime >=14.16.27033 url: https://conda.anaconda.org/conda-forge/win-64/xz-5.2.6-h8d14728_0.tar.bz2 hash: md5: 515d77642eaa3639413c6b1bc3f94219 sha256: 54d9778f75a02723784dc63aff4126ff6e6749ba21d11a6d03c1f4775f269fe0 - optional: false - category: main build: h8d14728_0 arch: x86_64 subdir: win-64 @@ -19799,18 +23521,17 @@ package: license: LGPL-2.1 and GPL-2.0 size: 217804 timestamp: 1660346976440 -- name: yaml +- platform: linux-64 + name: yaml version: 0.2.5 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=9.4.0' + - libgcc-ng >=9.4.0 url: https://conda.anaconda.org/conda-forge/linux-64/yaml-0.2.5-h7f98852_2.tar.bz2 hash: md5: 4cb3ad778ec2d5a7acbdf254eb1c42ae sha256: a4e34c710eeb26945bdbdaba82d3d74f60a78f54a874ec10d373811a5d217535 - optional: false - category: main build: h7f98852_2 arch: x86_64 subdir: linux-64 @@ -19819,17 +23540,16 @@ package: license_family: MIT size: 89141 timestamp: 1641346969816 -- name: yaml +- platform: osx-64 + name: yaml version: 0.2.5 + category: main manager: conda - platform: osx-64 - dependencies: {} + dependencies: [] url: https://conda.anaconda.org/conda-forge/osx-64/yaml-0.2.5-h0d85af4_2.tar.bz2 hash: md5: d7e08fcf8259d742156188e8762b4d20 sha256: 5301417e2c8dea45b401ffee8df3957d2447d4ce80c83c5ff151fc6bfe1c4148 - optional: false - category: main build: h0d85af4_2 arch: x86_64 subdir: osx-64 @@ -19838,19 +23558,18 @@ package: license_family: MIT size: 84237 timestamp: 1641347062780 -- name: yaml +- platform: win-64 + name: yaml version: 0.2.5 + category: main manager: conda - platform: win-64 dependencies: - vc: '>=14.1,<15.0a0' - vs2015_runtime: '>=14.16.27012' + - vc >=14.1,<15.0a0 + - vs2015_runtime >=14.16.27012 url: https://conda.anaconda.org/conda-forge/win-64/yaml-0.2.5-h8ffe710_2.tar.bz2 hash: md5: adbfb9f45d1004a26763652246a33764 sha256: 4e2246383003acbad9682c7c63178e2e715ad0eb84f03a8df1fbfba455dfedc5 - optional: false - category: main build: h8ffe710_2 arch: x86_64 subdir: win-64 @@ -19859,20 +23578,19 @@ package: license_family: MIT size: 63274 timestamp: 1641347623319 -- name: zeromq +- platform: linux-64 + name: zeromq version: 4.3.5 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=12' - libsodium: '>=1.0.18,<1.0.19.0a0' - libstdcxx-ng: '>=12' + - libgcc-ng >=12 + - libsodium >=1.0.18,<1.0.19.0a0 + - libstdcxx-ng >=12 url: https://conda.anaconda.org/conda-forge/linux-64/zeromq-4.3.5-h59595ed_0.conda hash: md5: 8851084c192dbc56215ac4e3c9aa30fa sha256: 53bf2a18224406e9806adb3b270a2c8a028aca0c89bd40114a85d6446f5c98d1 - optional: false - category: main build: h59595ed_0 arch: x86_64 subdir: linux-64 @@ -19881,20 +23599,19 @@ package: license_family: MOZILLA size: 343455 timestamp: 1697056638125 -- name: zeromq +- platform: osx-64 + name: zeromq version: 4.3.5 + category: main manager: conda - platform: osx-64 dependencies: - __osx: '>=10.9' - libcxx: '>=16.0.6' - libsodium: '>=1.0.18,<1.0.19.0a0' + - __osx >=10.9 + - libcxx >=16.0.6 + - libsodium >=1.0.18,<1.0.19.0a0 url: https://conda.anaconda.org/conda-forge/osx-64/zeromq-4.3.5-h93d8f39_0.conda hash: md5: 4c055e46b394be36681fe476c1e2ee6e sha256: 19be553b3cc8352b6e842134b8de66ae39fcae80bc575c203076370faab6009c - optional: false - category: main build: h93d8f39_0 arch: x86_64 subdir: osx-64 @@ -19903,21 +23620,20 @@ package: license_family: MOZILLA size: 294253 timestamp: 1697057208271 -- name: zeromq +- platform: win-64 + name: zeromq version: 4.3.5 + category: main manager: conda - platform: win-64 dependencies: - libsodium: '>=1.0.18,<1.0.19.0a0' - ucrt: '>=10.0.20348.0' - vc: '>=14.2,<15' - vc14_runtime: '>=14.29.30139' + - libsodium >=1.0.18,<1.0.19.0a0 + - ucrt >=10.0.20348.0 + - vc >=14.2,<15 + - vc14_runtime >=14.29.30139 url: https://conda.anaconda.org/conda-forge/win-64/zeromq-4.3.5-h63175ca_0.conda hash: md5: e954e1881091405f36416f772292b396 sha256: f8377793c36e19da17bbb8cf517f1a969b89e1cc7cb9622dc6d60c3d1383c919 - optional: false - category: main build: h63175ca_0 arch: x86_64 subdir: win-64 @@ -19926,18 +23642,17 @@ package: license_family: MOZILLA size: 4210250 timestamp: 1697057168534 -- name: zipp +- platform: linux-64 + name: zipp version: 3.17.0 + category: main manager: conda - platform: linux-64 dependencies: - python: '>=3.8' + - python >=3.8 url: https://conda.anaconda.org/conda-forge/noarch/zipp-3.17.0-pyhd8ed1ab_0.conda hash: md5: 2e4d6bc0b14e10f895fc6791a7d9b26a sha256: bced1423fdbf77bca0a735187d05d9b9812d2163f60ab426fc10f11f92ecbe26 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: linux-64 @@ -19947,18 +23662,17 @@ package: noarch: python size: 18954 timestamp: 1695255262261 -- name: zipp +- platform: osx-64 + name: zipp version: 3.17.0 + category: main manager: conda - platform: osx-64 dependencies: - python: '>=3.8' + - python >=3.8 url: https://conda.anaconda.org/conda-forge/noarch/zipp-3.17.0-pyhd8ed1ab_0.conda hash: md5: 2e4d6bc0b14e10f895fc6791a7d9b26a sha256: bced1423fdbf77bca0a735187d05d9b9812d2163f60ab426fc10f11f92ecbe26 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: osx-64 @@ -19968,18 +23682,17 @@ package: noarch: python size: 18954 timestamp: 1695255262261 -- name: zipp +- platform: win-64 + name: zipp version: 3.17.0 + category: main manager: conda - platform: win-64 dependencies: - python: '>=3.8' + - python >=3.8 url: https://conda.anaconda.org/conda-forge/noarch/zipp-3.17.0-pyhd8ed1ab_0.conda hash: md5: 2e4d6bc0b14e10f895fc6791a7d9b26a sha256: bced1423fdbf77bca0a735187d05d9b9812d2163f60ab426fc10f11f92ecbe26 - optional: false - category: main build: pyhd8ed1ab_0 arch: x86_64 subdir: win-64 @@ -19989,19 +23702,18 @@ package: noarch: python size: 18954 timestamp: 1695255262261 -- name: zlib +- platform: linux-64 + name: zlib version: 1.2.13 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=12' - libzlib: ==1.2.13 hd590300_5 + - libgcc-ng >=12 + - libzlib 1.2.13 hd590300_5 url: https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.13-hd590300_5.conda hash: md5: 68c34ec6149623be41a1933ab996a209 sha256: 9887a04d7e7cb14bd2b52fa01858f05a6d7f002c890f618d9fcd864adbfecb1b - optional: false - category: main build: hd590300_5 arch: x86_64 subdir: linux-64 @@ -20010,18 +23722,17 @@ package: license_family: Other size: 92825 timestamp: 1686575231103 -- name: zlib +- platform: osx-64 + name: zlib version: 1.2.13 + category: main manager: conda - platform: osx-64 dependencies: - libzlib: ==1.2.13 h8a1eda9_5 + - libzlib 1.2.13 h8a1eda9_5 url: https://conda.anaconda.org/conda-forge/osx-64/zlib-1.2.13-h8a1eda9_5.conda hash: md5: 75a8a98b1c4671c5d2897975731da42d sha256: d1f4c82fd7bd240a78ce8905e931e68dca5f523c7da237b6b63c87d5625c5b35 - optional: false - category: main build: h8a1eda9_5 arch: x86_64 subdir: osx-64 @@ -20030,21 +23741,20 @@ package: license_family: Other size: 90764 timestamp: 1686575574678 -- name: zlib +- platform: win-64 + name: zlib version: 1.2.13 + category: main manager: conda - platform: win-64 dependencies: - libzlib: ==1.2.13 hcfcfb64_5 - ucrt: '>=10.0.20348.0' - vc: '>=14.2,<15' - vc14_runtime: '>=14.29.30139' + - libzlib 1.2.13 hcfcfb64_5 + - ucrt >=10.0.20348.0 + - vc >=14.2,<15 + - vc14_runtime >=14.29.30139 url: https://conda.anaconda.org/conda-forge/win-64/zlib-1.2.13-hcfcfb64_5.conda hash: md5: a318e8622e11663f645cc7fa3260f462 sha256: 0f91b719c7558046bcd37fdc7ae4b9eb2b7a8e335beb8b59ae7ccb285a46aa46 - optional: false - category: main build: hcfcfb64_5 arch: x86_64 subdir: win-64 @@ -20053,20 +23763,19 @@ package: license_family: Other size: 107711 timestamp: 1686575474476 -- name: zstd +- platform: linux-64 + name: zstd version: 1.5.5 + category: main manager: conda - platform: linux-64 dependencies: - libgcc-ng: '>=12' - libstdcxx-ng: '>=12' - libzlib: '>=1.2.13,<1.3.0a0' + - libgcc-ng >=12 + - libstdcxx-ng >=12 + - libzlib >=1.2.13,<1.3.0a0 url: https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda hash: md5: 04b88013080254850d6c01ed54810589 sha256: 607cbeb1a533be98ba96cf5cdf0ddbb101c78019f1fda063261871dad6248609 - optional: false - category: main build: hfc55251_0 arch: x86_64 subdir: linux-64 @@ -20075,18 +23784,17 @@ package: license_family: BSD size: 545199 timestamp: 1693151163452 -- name: zstd +- platform: osx-64 + name: zstd version: 1.5.5 + category: main manager: conda - platform: osx-64 dependencies: - libzlib: '>=1.2.13,<1.3.0a0' + - libzlib >=1.2.13,<1.3.0a0 url: https://conda.anaconda.org/conda-forge/osx-64/zstd-1.5.5-h829000d_0.conda hash: md5: 80abc41d0c48b82fe0f04e7f42f5cb7e sha256: d54e31d3d8de5e254c0804abd984807b8ae5cd3708d758a8bf1adff1f5df166c - optional: false - category: main build: h829000d_0 arch: x86_64 subdir: osx-64 @@ -20095,21 +23803,20 @@ package: license_family: BSD size: 499383 timestamp: 1693151312586 -- name: zstd +- platform: win-64 + name: zstd version: 1.5.5 + category: main manager: conda - platform: win-64 dependencies: - libzlib: '>=1.2.13,<1.3.0a0' - ucrt: '>=10.0.20348.0' - vc: '>=14.2,<15' - vc14_runtime: '>=14.29.30139' + - libzlib >=1.2.13,<1.3.0a0 + - ucrt >=10.0.20348.0 + - vc >=14.2,<15 + - vc14_runtime >=14.29.30139 url: https://conda.anaconda.org/conda-forge/win-64/zstd-1.5.5-h12be248_0.conda hash: md5: 792bb5da68bf0a6cac6a6072ecb8dbeb sha256: d540dd56c5ec772b60e4ce7d45f67f01c6614942225885911964ea1e70bb99e3 - optional: false - category: main build: h12be248_0 arch: x86_64 subdir: win-64 diff --git a/pixi.toml b/pixi.toml index 711f063..d0bd13d 100644 --- a/pixi.toml +++ b/pixi.toml @@ -12,17 +12,25 @@ license-file = "LICENSE" # Installation install-hydamo = "pip install --no-deps --editable src/hydamo" install-ribasim_nl = "pip install --no-deps --editable src/ribasim_nl" -install-quartodoc = "pip install quartodoc" install-pre-commit = "pre-commit install" install-without-pre-commit = { depends_on = [ "install-hydamo", - "install-ribasim_nl", - "install-quartodoc", + "install-ribasim_nl", ] } install = { depends_on = [ "install-without-pre-commit", "install-pre-commit", ] } +# Docs +quartodoc-build = { cmd = "quartodoc build && rm objects.json", cwd = "docs" } +quarto-preview = { cmd = "export QUARTO_PYTHON=python && quarto preview docs", depends_on = [ + "quartodoc-build", +] } +quarto-check = { cmd = "quarto check all", depends_on = ["quartodoc-build"] } +quarto-render = { cmd = "export QUARTO_PYTHON=python && quarto render docs --to html --execute", depends_on = [ + "quartodoc-build", +] } +docs = { depends_on = ["build-julia-docs", "quarto-preview"] } # Lint mypy-hydamo = "mypy --ignore-missing-imports src/hydamo" pre-commit = "pre-commit run --all-files" @@ -45,6 +53,7 @@ tests = { depends_on = [ fiona = "*" geopandas = "*" ipykernel = "*" +jupyterlab = "*" matplotlib = "*" mypy = "*" pandas = "*" @@ -57,6 +66,8 @@ pytest = "*" pytest-cov = "*" pytest-xdist = "*" python = ">=3.9" +quarto = "*" +quartodoc = "*" rasterstats = "*" requests = "*" ribasim = "0.5.0.*"