Update RDA/CCA functions (microbiome#639)

Signed-off-by: Daena Rys <[email protected]> Co-authored-by: Daena Rys <[email protected]> Co-authored-by: Muluh <[email protected]>
Daenarys8 · Oct 7, 2024 · c76bc90 · c76bc90
1 parent 1923e87
commit c76bc90
Show file tree

Hide file tree

Showing 5 changed files with 598 additions and 535 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: mia
 Type: Package
-Version: 1.13.45
+Version: 1.13.46
 Authors@R:
     c(person(given = "Felix G.M.", family = "Ernst", role = c("aut"),
              email = "[email protected]",

diff --git a/NAMESPACE b/NAMESPACE
@@ -375,6 +375,7 @@ importFrom(rlang,":=")
 importFrom(rlang,sym)
 importFrom(scuttle,sumCountsAcrossFeatures)
 importFrom(scuttle,summarizeAssayByGroup)
+importFrom(stats,TukeyHSD)
 importFrom(stats,anova)
 importFrom(stats,as.dist)
 importFrom(stats,as.formula)
@@ -409,6 +410,10 @@ importFrom(vegan,"sppscores<-")
 importFrom(vegan,anova.cca)
 importFrom(vegan,avgdist)
 importFrom(vegan,betadisper)
+importFrom(vegan,cca)
+importFrom(vegan,dbrda)
+importFrom(vegan,eigenvals)
 importFrom(vegan,monoMDS)
+importFrom(vegan,permutest)
 importFrom(vegan,scores)
 importFrom(vegan,vegdist)