diff --git a/.github/workflows/CompatHelper.yml b/.github/workflows/CompatHelper.yml index 1eb68ea..3dfba52 100644 --- a/.github/workflows/CompatHelper.yml +++ b/.github/workflows/CompatHelper.yml @@ -3,24 +3,43 @@ on: schedule: - cron: 0 0 * * * workflow_dispatch: +permissions: + contents: write + pull-requests: write jobs: CompatHelper: runs-on: ubuntu-latest steps: + - name: Check if Julia is already available in the PATH + id: julia_in_path + run: which julia + continue-on-error: true + - name: Install Julia, but only if it is not already available in the PATH + uses: julia-actions/setup-julia@v1 + with: + version: '1' + arch: ${{ runner.arch }} + if: steps.julia_in_path.outcome != 'success' + - name: "Add the General registry via Git" + run: | + import Pkg + ENV["JULIA_PKG_SERVER"] = "" + Pkg.Registry.add("General") + shell: julia --color=yes {0} - name: "Install CompatHelper" run: | import Pkg name = "CompatHelper" uuid = "aa819f21-2bde-4658-8897-bab36330d9b7" - version = "2" + version = "3" Pkg.add(; name, uuid, version) shell: julia --color=yes {0} - name: "Run CompatHelper" run: | import CompatHelper - CompatHelper.main(master_branch = "master") + CompatHelper.main() shell: julia --color=yes {0} env: GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} COMPATHELPER_PRIV: ${{ secrets.DOCUMENTER_KEY }} - # COMPATHELPER_PRIV: ${{ secrets.COMPATHELPER_PRIV }} + # COMPATHELPER_PRIV: ${{ secrets.COMPATHELPER_PRIV }} \ No newline at end of file diff --git a/.github/workflows/TagBot.yml b/.github/workflows/TagBot.yml index 6d2efc1..ba6db9e 100644 --- a/.github/workflows/TagBot.yml +++ b/.github/workflows/TagBot.yml @@ -1,11 +1,25 @@ name: TagBot - on: issue_comment: types: - created workflow_dispatch: - + inputs: + lookback: + default: "3" +permissions: + actions: read + checks: read + contents: write + deployments: read + issues: read + discussions: read + packages: read + pages: read + pull-requests: read + repository-projects: read + security-events: read + statuses: read jobs: TagBot: if: github.event_name == 'workflow_dispatch' || github.actor == 'JuliaTagBot' @@ -14,4 +28,6 @@ jobs: - uses: JuliaRegistries/TagBot@v1 with: token: ${{ secrets.GITHUB_TOKEN }} + # Edit the following line to reflect the actual name of the GitHub Secret containing your private key ssh: ${{ secrets.DOCUMENTER_KEY }} + # ssh: ${{ secrets.NAME_OF_MY_SSH_PRIVATE_KEY_SECRET }} \ No newline at end of file diff --git a/.github/workflows/UnitTests.yml b/.github/workflows/UnitTests.yml index 894ce71..42440c8 100644 --- a/.github/workflows/UnitTests.yml +++ b/.github/workflows/UnitTests.yml @@ -4,6 +4,11 @@ on: - push - pull_request +# needed to allow julia-actions/cache to delete old caches that it has created +permissions: + actions: write + contents: read + jobs: test: name: Julia ${{ matrix.julia-version }} - ${{ matrix.os }} - ${{ matrix.julia-arch }} - ${{ github.event_name }} @@ -13,7 +18,7 @@ jobs: fail-fast: false matrix: julia-version: - - '1.0' # LTS + - '1.6' # LTS - '1' julia-arch: [x64, x86] os: [ubuntu-latest, windows-latest, macOS-latest] @@ -29,17 +34,23 @@ jobs: steps: - name: Checkout Repository - uses: actions/checkout@v2 + uses: actions/checkout@v4 - name: Setup Julia uses: julia-actions/setup-julia@v1 with: version: ${{ matrix.julia-version }} + arch: ${{ matrix.julia-arch }} + - uses: julia-actions/cache@v1 + - uses: julia-actions/julia-buildpkg@v1 - name: Run Tests uses: julia-actions/julia-runtest@v1 + with: + annotate: true - name: Create CodeCov uses: julia-actions/julia-processcoverage@v1 - name: Upload CodeCov - uses: codecov/codecov-action@v1 + uses: codecov/codecov-action@v4 with: - file: ${{ steps.coverage-processing.outputs.lcov-file }} - fail_ci_if_error: false + files: lcov.info + token: ${{ secrets.CODECOV_TOKEN }} + fail_ci_if_error: false \ No newline at end of file diff --git a/Project.toml b/Project.toml index 3832477..25817c0 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "Bedgraph" uuid = "0bcc2ff6-69eb-520d-bede-0374fc5bd2fd" authors = ["CiarĂ¡n O'Mara "] -version = "2.2.0" +version = "2.3.0" [compat] julia = "0.7, 1"