environment.yml

name: ctsm-py
channels:
    - conda-forge
    - bioconda
    - defaults
dependencies:
    - python=3.7    # Python version 3.7
    - bottleneck    # C-optimized array functions for NumPy
    - cartopy       # Geographic plotting toolkit
    - cftime
    - cf_units
    - dask          # Parallel processing library
    - future        # Python 2/3 compatibility
    - h5py          # Wrapper for HDF5
    - ipython       # IPython interpreter and tools
    - jupyter       # Jupyter federation architecture
    - matplotlib    # 2D plotting library
    - ncar-jobqueue
    - nc-time-axis
    - netcdf4       # Wrapper for netcdf4
    - notebook      # Notebook interface
    - numpy         # N-d array and numerics
    - pandas        # Labeled array library
    - scipy         # Common math/stats/science functions
    - scikit-learn  # Macine learning library
    - seaborn       # Statistical visualizations
    - six           # Python 2/3 compatibility
    - tqdm          # Nice progressbar for longer computations
    - xarray=0.16.2 # N-d labeled array library
    - r-base        # R base code
    - r-essentials
    - r-ncdf4
    - r-devtools
    - r-eml
    - r-rcurl
    - bioconductor-rhdf5