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.Rhistory
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library(ggplot2)
install.packages(c("BiocManager", "boot", "class", "cli", "codetools", "colorspace", "digest", "fansi", "foreign", "ggplot2", "isoband", "MASS", "Matrix", "mgcv", "nlme", "nnet", "purrr", "rpart", "spatial", "survival", "utf8", "vctrs"))
install.packages(c("BiocManager", "boot", "class", "cli", "codetools", "colorspace", "digest", "fansi", "foreign", "ggplot2", "isoband", "MASS", "Matrix", "mgcv", "nlme", "nnet", "purrr", "rpart", "spatial", "survival", "utf8", "vctrs"))
install.packages(c("BiocManager", "boot", "class", "cli", "codetools", "colorspace", "digest", "fansi", "foreign", "ggplot2", "isoband", "MASS", "Matrix", "mgcv", "nlme", "nnet", "purrr", "rpart", "spatial", "survival", "utf8", "vctrs"))
install.packages(c("BiocManager", "boot", "class", "cli", "codetools", "colorspace", "digest", "fansi", "foreign", "ggplot2", "isoband", "MASS", "Matrix", "mgcv", "nlme", "nnet", "purrr", "rpart", "spatial", "survival", "utf8", "vctrs"))
install.packages(c("BiocManager", "boot", "class", "cli", "codetools", "colorspace", "digest", "fansi", "foreign", "ggplot2", "isoband", "MASS", "Matrix", "mgcv", "nlme", "nnet", "purrr", "rpart", "spatial", "survival", "utf8", "vctrs"))
install.packages(c("BiocManager", "boot", "class", "cli", "codetools", "colorspace", "digest", "fansi", "foreign", "ggplot2", "isoband", "MASS", "Matrix", "mgcv", "nlme", "nnet", "purrr", "rpart", "spatial", "survival", "utf8", "vctrs"))
library(ggplot2)
rawdata = read.table(file = "Data20_6.CSV",
header = T,
stringsAsFactors = F,
sep = ",")
Df = rawdata[, c(1,2,3,4)]
Df$Table = as.factor(Df$Table)
limits = ceiling(max(abs(c(max(Df$X), max(Df$Y), min(Df$X), min(Df$Y))))/50)*50
for(t in Df$Table) {
Temp = Df[Df$Table == t, ]
Temp$X = Temp$X - Temp$X[1]
Temp$Y = Temp$Y - Temp$Y[1]
Df[Df$Table == t, ] = Temp
}
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
View(Df)
limits = ceiling(max(abs(c(max(Df$X), max(Df$Y), min(Df$X), min(Df$Y))))/50)*50
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(plot.background = element_rect(fill = "#FFFFFF"))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(plot.background = element_rect(fill = "#FFFFFF")
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(plot.background = element_rect(fill = "#FFFFFF"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(plot.background = element_rect(fill = "#FFFFFF", color = "#FFFFFF"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#FFFFFF"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#FFFFFF"),
panel.grid = element_line(color = "#808080")
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#FFFFFF"),
panel.grid = element_line(color = "#808080"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
scale_x_continuous(breaks = seq(0, limits+50, 100),
minor_breaks = seq(0, limits+50, 50))
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
scale_x_continuous(breaks = seq(0, limits+50, 100),
minor_breaks = seq(0, limits+50, 50)),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14)) +
scale_x_continuous(breaks = seq(0, limits+50, 100),
minor_breaks = seq(0, limits+50, 50))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14)) +
scale_x_continuous(breaks = seq(-(limits+50), limits+50, 100),
minor_breaks = seq(-(limits+50), limits+50, 50))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14)) +
scale_x_continuous(breaks = seq(-(limits+50), limits+50, 100),
minor_breaks = seq(-(limits+50), limits+50, 50)) +
scale_y_continuous(breaks = seq(-(limits+50), limits+50, 100),
minor_breaks = seq(-(limits+50), limits+50, 50))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14)) +
coord_fixed()
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14),
axis.ticks = element_line()) +
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14),
axis.ticks = element_line())
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14),
axis.ticks = element_line())
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14),
axis.ticks = element_line()) +
scale_x_discrete(breaks = seq(-500, 500, 125))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14),
axis.ticks = element_line()) +
scale_x_continuous(breaks = seq(-500, 500, 125))
seq(0,10,2)
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14),
axis.ticks = element_line())
source("E:/轨迹图绘制/轨迹图绘制.R")
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path() +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14),
axis.ticks = element_line())
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path(linewidth = 1) +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path(linewidth = 1.5) +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))
ggplot(Df, aes(x = X, y = Y, group = Table, color = Table)) +
geom_path(linewidth = .9) +
coord_fixed() +
theme(legend.position = "none") +
labs(x = "Distance from origin (μm)",
y = "Distance from origin (μm)",
title = "Representative trajectories",
subtitle = "0.5-6") +
xlim(c(-limits, limits)) + ylim(c(-limits, limits)) +
theme(panel.background = element_rect(fill = "#FFFFFF", color = "#000000"),
panel.grid = element_line(color = "#808080", linetype = "dashed"),
plot.title = element_text(hjust = 0.5, size = 16, face = "bold"),
plot.subtitle = element_text(hjust = 0.5, size = 14))