diff --git a/rnaseq/ccbr_rseqc_4.0.0/Dockerfile b/rnaseq/ccbr_rseqc_4.0.0/Dockerfile index 19d75a6..318444a 100755 --- a/rnaseq/ccbr_rseqc_4.0.0/Dockerfile +++ b/rnaseq/ccbr_rseqc_4.0.0/Dockerfile @@ -1,15 +1,11 @@ -FROM nciccbr/ccbr_ubuntu_base_20.04:v1.0 +FROM nciccbr/ccbr_ubuntu_base_20.04:v6 -RUN apt-get install -y zlibc zlib1g zlib1g-dev - -RUN apt-get install -y r-base-core libboost-dev - -RUN pip3 install --upgrade pip && pip3 install RSeQC +RUN pip3 install --upgrade pip && \ + pip3 install RSeQC==4.0.0 && \ + tin.py -h COPY Dockerfile /opt2 WORKDIR /data2 RUN apt-get clean - -MAINTAINER vishal.koparde@nih.gov diff --git a/rnaseq/ccbr_rseqc_4.0.0/meta.yml b/rnaseq/ccbr_rseqc_4.0.0/meta.yml new file mode 100644 index 0000000..c81d2b9 --- /dev/null +++ b/rnaseq/ccbr_rseqc_4.0.0/meta.yml @@ -0,0 +1,4 @@ +dockerhub_namespace: nciccbr +image_name: ccbr_rseqc_4.0.0 +version: v2 +container: "$(dockerhub_namespace)/$(image_name):$(version)"