From c5874ceba62d4f6bc2f496d53269bfbcfb1935e4 Mon Sep 17 00:00:00 2001 From: Kelly Sovacool Date: Mon, 18 Sep 2023 17:27:50 -0400 Subject: [PATCH] fix: install singularity on github actions --- .github/workflows/build.yml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index 3917cd75..2e7d3567 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -26,7 +26,8 @@ jobs: cache: "pip" - name: Install nextflow uses: nf-core/setup-nextflow@v1 - - name: Install dependencies + - uses: eWaterCycle/setup-singularity@v7 + - name: Install champagne run: | python -m pip install --upgrade pip setuptools pip install .[dev,test]