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pulls old bio_utils #7

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wbrazelton opened this issue Jun 20, 2024 · 0 comments
Open

pulls old bio_utils #7

wbrazelton opened this issue Jun 20, 2024 · 0 comments

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@wbrazelton
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wbrazelton commented Jun 20, 2024

When I do a fresh
pip install seq-qc
on a new system, it seems to install an older version of bio_utils than the current bio_utils github repo.

If I install bio_utils first, then install seq-qc, then it solves the previous problem and starts running qtrim on the first sample, printing the initial
"Processing input as paired-end reads"
message to the log file, then does nothing for the next 8 hours without any errors.

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