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Read in glia data #495

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juanchopanza opened this issue Sep 6, 2016 · 4 comments
Closed

Read in glia data #495

juanchopanza opened this issue Sep 6, 2016 · 4 comments

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@juanchopanza
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juanchopanza commented Sep 6, 2016

Glia f5 files have an extra block of data. See if these can be loaded without compromising performance or maintainability.

Example file

@dkeller9
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dkeller9 commented Sep 6, 2016

The extra surface area information can be used to:

  1. assign surface channels
  2. calibrate metabolic model
  3. validate geometrical models
  4. visualize the astrocytes

@juanchopanza
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This isn't very relevant to NeuroM. What is relevant is that you're interested in surface area. But how do you define it in terms of the new info?

@dkeller9
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dkeller9 commented Sep 7, 2016

It would be nice to have an easy way to access the data from NeuroM.

@asanin-epfl
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As of NeuroM v2 the reading is on MorphIO. Closing in favor of BlueBrain/MorphIO#256.

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