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Current samtools docker images do not include working plot-bamstats (a samtools utility for generating plots from previously runs of samtools stats). It would be nice to have a docker image with capabilities for running plot-bamstats.
In order to be able to run plot-bamstats, installation of gnuplot is needed (which also requires perl installation).
The text was updated successfully, but these errors were encountered:
Can we instead create a plot-bamstats container instead? gnuplot is large on its own https://quay.io/repository/biocontainers/gnuplot .. I would like to avoid blowing up our tiny samtools container by 100MB
Current samtools docker images do not include working
plot-bamstats
(a samtools utility for generating plots from previously runs ofsamtools stats
). It would be nice to have a docker image with capabilities for runningplot-bamstats
.In order to be able to run
plot-bamstats
, installation ofgnuplot
is needed (which also requiresperl
installation).The text was updated successfully, but these errors were encountered: