The official server with ClinGen Pathogenicity Calculator is available at http://calculator.clinicalgenome.org. If you want to use Pathogenicity Calculator just follow the link and ask for an account on that server.
This repository contains source codes of services provided by the ClinGen Pathogenicity Calculator server. You can find installation instruction in the file doc/installation.pdf. Installation and source packages can be obtained from the page with releases. You need a server with Genboree to install your own instance of Pathogenicity Calculator.
Use of this software is governed by a license. See the file LICENSE for details.