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all structured data.md

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All structured data

Structured data is a set of attributes that are grouped together and used to describe the same subject in more detail. The attributes embedded in the structured attributes are described here together with their entity-specific attribute codes.

Anatomical site

Attribute Name Description Data Type Constraints Attribute Codes
Anatomical site ontology Name of ontology used for describing the anatomical source of the sample material, for example, ICD-O-3 topography code String MIABIS-SAMPLE-05-01 and MIABIS-SAMPLE-05-02 are required if any ontology information is provided MIABIS-SAMPLE-05-01
Anatomical site ontology version Version of selected ontology for anatomical site String MIABIS-SAMPLE-05-01 and MIABIS-SAMPLE-05-02 are required if any ontology information is provided MIABIS-SAMPLE-05-02
Anatomical site ontology code Anatomical site code from the selected anatomical site ontology version String MIABIS-SAMPLE-05-03
Anatomical site ontology description Description from the selected anatomical site ontology code String MIABIS-SAMPLE-05-04
Anatomical site free text Explanation about Anatomical site in case of unknown Anatomical site or insufficient information String MIABIS-SAMPLE-05-05

Contact information

Attribute Name Description Data Type Constraints Attribute Codes
First name First name of the Contact String MIABIS-BIOBANK-07-01, MIABIS-COLLECTION-05-01, MIABIS-RESEARCHRESOURCE-05-01, MIABIS-NETWORK-07-01
Last name Last name of the the Contact String MIABIS-BIOBANK-07-02, MIABIS-COLLECTION-05-02, MIABIS-RESEARCHRESOURCE-05-02, MIABIS-NETWORK-07-02
Phone Phone to the Contact including international call prefix Formatted String MIABIS-BIOBANK-07-03, MIABIS-COLLECTION-05-03, MIABIS-RESEARCHRESOURCE-05-03, MIABIS-NETWORK-07-03
Email Email address of the Contact person String MIABIS-BIOBANK-07-04, MIABIS-COLLECTION-05-04, MIABIS-RESEARCHRESOURCE-05-04, MIABIS-NETWORK-07-04
Address Street name and street number or PO Box of the Contact person String MIABIS-BIOBANK-07-05, MIABIS-COLLECTION-05-05, MIABIS-RESEARCHRESOURCE-05-05, MIABIS-NETWORK-07-05
ZIP ZIP of the Contact person String MIABIS-BIOBANK-07-06, MIABIS-COLLECTION-05-06, MIABIS-RESEARCHRESOURCE-05-06, MIABIS-NETWORK-07-06
City City of the Contact person String MIABIS-BIOBANK-07-07, MIABIS-COLLECTION-05-07, MIABIS-RESEARCHRESOURCE-05-07, MIABIS-NETWORK-07-07
Country Country of the Contact person String ISO-standard 3166 alpha2 MIABIS-BIOBANK-07-08, MIABIS-COLLECTION-05-08, MIABIS-RESEARCHRESOURCE-05-08, MIABIS-NETWORK-07-08
Juristic Person Juristic person for the researcher e.g. a university, concern, county council etc. String Optional, use when applicable MIABIS-BIOBANK-07-09, MIABIS-COLLECTION-05-09, MIABIS-RESEARCHRESOURCE-05-09, MIABIS-NETWORK-07-09
Department Department (e.g. division), or corresponding affiliation of the Contact person String Optional, use when applicable MIABIS-BIOBANK-07-10, MIABIS-COLLECTION-05-10, MIABIS-RESEARCHRESOURCE-05-10, MIABIS-NETWORK-07-10
ORCID The persistent digital identifier that distinguishes researchers. As defined by ORCID String Optional, use when applicable MIABIS-BIOBANK-07-11, MIABIS-COLLECTION-05-11, MIABIS-RESEARCHRESOURCE-05-11, MIABIS-NETWORK-07-11

Disease

Attribute Name Description Data Type Constraints Attribute Codes
Disease Ontology Name of ontology used for disease. Can be several values e.g. ICD, SNOMED String MIABIS-COLLECTION-17-01, MIABIS-RESEARCHRESOURCE-15-01
Disease Ontology Version Version of selected ontology for disease e.g. ICD-9, ICD-10, SNOMED-CT String MIABIS-COLLECTION-17-02, MIABIS-RESEARCHRESOURCE-15-02
Disease Ontology Code Disease code or main category from the selected Disease Ontology Version e.g. C61 String MIABIS-COLLECTION-17-03, MIABIS-RESEARCHRESOURCE-15-03
Disease Ontology Description Description from the selected Disease Ontology Code e.g : Malignant neoplasm of prostate String MIABIS-COLLECTION-17-04, MIABIS-RESEARCHRESOURCE-15-04
Disease Free Text Explanation about disease or symptom in case of unknown disease or insufficient information String MIABIS-COLLECTION-17-05, MIABIS-RESEARCHRESOURCE-15-05