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form.yml.erb
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form:
- samplesheet
- af_method
- prot_mode
- email
cluster: "katana"
attributes:
samplesheet:
widget: "text_field"
pattern: "*.csv^"
help: |
Paste single amino acid sequence <b>or</b>, path to your Samplesheet CSV
e.g.; /srv/scratch/z3545907/Experiment/samplesheet.csv<br>e.g.; MPGAFSQNSSKRRAVLPRSHRVAGRGPAEAGCLPGAPAGS
email:
widget: "text_field"
prot_mode:
widget: "select"
label: "Mode"
options:
- ["Multimer", "multimer"]
- ["Monomer", "monomoer"]
af_method:
widget: "select"
label: "Method"
help: |
Alphafold 2 - High Accuracy, Slower
ColabFold - Medium Accuracy, Faster
ESMFold - Medium/Low Accuracy, Fastest, No Evolutionary Sequence Calculation
options:
- ["Alphafold 2", "af2", data-hide-mode: false]
- ["ColabFold", "cf", data-hide-mode: true]
- ["ESMFold", "esmf", data-hide-mode: false]