diff --git a/build.gradle b/build.gradle index ccb9e37e..1351f98d 100644 --- a/build.gradle +++ b/build.gradle @@ -101,9 +101,6 @@ dependencies { implementation 'org.apache.tika:tika-parsers:1.3' implementation "commons-fileupload:commons-fileupload:1.3.1" - implementation 'net.sf.jasperreports:jasperreports:6.4.1' - implementation 'net.sf.jasperreports:jasperreports-functions:6.4.1' - implementation 'au.org.ala:jasper-liberation-fonts-2.00.1:1.3' implementation 'net.glxn:qrgen:1.4' implementation 'org.apache.xmlgraphics:batik-bridge:1.9' implementation 'org.apache.xmlgraphics:batik-svggen:1.9' @@ -218,35 +215,4 @@ bootWar { publish { dependsOn assemble -} - - -tasks.register('reportCompile') { - ant.property(name: 'jasper.path', value: 'jasperreports-6.4.1.jar') - -// ant.taskdef(resource: "com/abc/ant/antlib.xml", classpath: ant.properties['jasper.path'], loaderref: 'abc') - - - println "\n- Starting JasperReports *.jrxml compilation process..." - println configurations.runtimeClasspath.asPath - // define the Jasper Reports Compile Task - ant.taskdef(name:'reportCompile', classname: 'net.sf.jasperreports.ant.JRAntCompileTask', classpath: configurations.runtimeClasspath.asPath) - - // remove existing jasper files - ant.delete{ - fileset('dir':'grails-app/conf/reports', 'defaultexcludes':'yes'){ - include('name':'**/*.jasper') - } - } - - // create a temporary directory for use by the jasper compiler - ant.mkdir(dir:'target/jasper') - - // compile the reports - ant.reportCompile(srcdir:'grails-app/conf/reports', destdir:'grails-app/conf/reports', tempdir:'target/jasper', keepJava:true, xmlvalidation:true){ - include(name:'**/*.jrxml') -// include(classpath: configurations.developmentOnly.asPath) -// include(name:'**/*.jrtx') - } - println "-------\n- JasperReports compilation process finished" } \ No newline at end of file diff --git a/grails-app/assets/javascripts/profileEditor/templates/exportPdf.tpl.htm b/grails-app/assets/javascripts/profileEditor/templates/exportPdf.tpl.htm deleted file mode 100644 index 1cd24597..00000000 --- a/grails-app/assets/javascripts/profileEditor/templates/exportPdf.tpl.htm +++ /dev/null @@ -1,49 +0,0 @@ -
- - - - - -
\ No newline at end of file diff --git a/grails-app/conf/jasperreports.properties b/grails-app/conf/jasperreports.properties deleted file mode 100644 index b1052362..00000000 --- a/grails-app/conf/jasperreports.properties +++ /dev/null @@ -1,3 +0,0 @@ -#net.sf.jasperreports.default.font.name=DejaVu Sans -#net.sf.jasperreports.default.pdf.font.name=Helvetica -net.sf.jasperreports.default.font.name=Liberation Sans \ No newline at end of file diff --git a/grails-app/conf/reports/profiles/Acacia-paradoxa-DC.json b/grails-app/conf/reports/profiles/Acacia-paradoxa-DC.json deleted file mode 100644 index 19517335..00000000 --- a/grails-app/conf/reports/profiles/Acacia-paradoxa-DC.json +++ /dev/null @@ -1,6048 +0,0 @@ -{ - "cover": { - "logo": "http://root.ala.org.au/bdrs-core/files/download.htm?className=au.com.gaiaresources.bdrs.model.theme.Theme&id=217&fileName=processed/images/bdrs/atlasoflivingaust.png", - "title": "NSW flora", - "subtitle": "Acacia paradoxa DC.", - "primaryImage": "http://images.ala.org.au/image/proxyImageThumbnailLarge?imageId=dfc0883d-1fab-4689-a922-b6f30ab93236", - "banner": "http://images.ala.org.au//store/7/4/4/e/a08a52f2-7bbe-40d9-8f1a-fe8acb28e447/original", - "authorship": "P.G. Kodela", - "citation": "P.G. Kodela (2015) Acacia paradoxa DC.. In: Kellermann, J. (ed.), Flora of South Australia (ed. 5). 10 pp. (State Herbarium of South Australia: Adelaide). http://localhost:8080/profile-hub/opus/39295895-f9cd-4189-bc19-64bd46cd689b. 27 July 2015 - 02:38", - "headerTitleHtml": "Flora
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Aiton, W. 1789: Hortus Kewensis 3

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Allan, H.H. 1961: Flora of New Zealand. Vol. I. Indigenous Tracheophyta: Psilopsida, Lycopsida,Filicopsida, Gymnospermae, Dicotyledones. Government Printer, Wellington.

", - "order": 1, - "uuid": "268fd12a-d3ac-43c9-8216-82670e63483f", - "plainText": "Allan, H.H. 1961: Flora of New Zealand. Vol. I. Indigenous Tracheophyta: Psilopsida, Lycopsida,Filicopsida, Gymnospermae, Dicotyledones. Government Printer, Wellington." - }, - { - "text": "

de Labillardière, J.J.H. 1806: Novae Hollandiae Plantarum Specimen. Vol. Vol. 2. Huzard, Paris.

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(1996). Mimosaceae. In: Walsh, N.G.; Entwisle, T.J. (eds), Flora of Victoria. Vol. 3. Dicotyledons Winteraceae to Myrtaceae. Inkata Press, Melbourne.", - "items": [ - { - "id": 1, - "text": "Mature leaves modified into phyllodes (either flat, spiny or needle-like) or absent", - "target": 2 - }, - { - "id": 1, - "text": "Mature leaves bipinnate", - "target": 114 - }, - { - "id": 2, - "text": "Flowers in globular (rarely obloid) heads", - "target": 3 - }, - { - "id": 2, - "text": "Flowers in cylindric spikes", - "target": 100 - }, - { - "id": 3, - "text": "Phyllodes with more than 1 main vein or veins obscure", - "target": 4 - }, - { - "id": 3, - "text": "Phyllodes with 1 main vein per face (if 4-angled in cross-section then 4-veined overall)", - "target": 37 - } - ] - }, - "nomenclature": { - "formattedName": "bla bla bla bla", - "details": [ - { - "text": "line 1" - }, - { - "text": "line 2" - }, - { - "text": "line 3" - }, - { - "text": "line 4" - } - ] - }, - "classifications": [ - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:661518", - "rawRank": "Kingdom", - "rank": "kingdom", - "scientificName": "Plantae", - "profileUuid": "" - }, - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:412162", - "rawRank": "", - "rank": "phylum", - "scientificName": "Charophyta", - "profileUuid": "" - }, - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:406945", - "rawRank": "Class", - "rank": "class", - "scientificName": "Equisetopsida", - "profileUuid": "58b5597f-d14b-42a5-b07d-b1e90d05b86e" - }, - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:417544", - "rawRank": "Subclass", - "rank": "subclass", - "scientificName": "Magnoliidae", - "profileUuid": "" - }, - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:418427", - "rawRank": "Order", - "rank": "order", - "scientificName": "Fabales", - "profileUuid": "" - }, - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:397778", - "rawRank": "Family", - "rank": "family", - "scientificName": "Fabaceae", - "profileUuid": "8ec788eb-ad22-4bf4-bd16-675d2d86c05f" - }, - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:295861", - "rawRank": "Genus", - "rank": "genus", - "scientificName": "Acacia", - "profileUuid": "f5f0ea82-3b3c-46d2-ad82-89d631bc9f48" - }, - { - "guid": "urn:lsid:biodiversity.org.au:apni.taxon:298640", - "rawRank": "Species", - "rank": "species", - "scientificName": "Acacia paradoxa", - "profileUuid": "bee218e6-e0a4-4b99-8c5e-e63a6e1b93aa" - } - ], - "bhl": [ - { - "id": null, - "edition": "Rev. and adapted to American zoology / by Joseph B. 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Kodela", - "title": "Fruit", - "text": "Pods ± straight, raised over seeds, ± straight-sided or irregularly ± constricted between seeds, 2–7 cm long, 3–5 mm wide, densely hairy; seeds longitudinal; funicle filiform or expanded towards seed.", - "order": -1, - "source": null, - "original": null, - "uuid": "8db3880d-faad-499e-a3f0-37586c0db557", - "editors": "", - "required": false, - "plainText": "Pods ± straight, raised over seeds, ± straight-sided or irregularly ± constricted between seeds, 2–7 cm long, 3–5 mm wide, densely hairy; seeds longitudinal; funicle filiform or expanded towards seed.", - "profile": { - "scientificName": "Acacia paradoxa", - "uuid": "bee218e6-e0a4-4b99-8c5e-e63a6e1b93aa", - "opus": { - "title": "NSW flora", - "uuid": "39295895-f9cd-4189-bc19-64bd46cd689b", - "shortName": null - } - } - }, - { - "creators": "P.G. Kodela", - "title": "Leaves", - "text": "Phyllodes lanceolate to narrowly elliptic, straight or slightly curved, 0.8–3 cm long, 2.5–7 mm wide, glabrous to hairy, midvein and marginal veins prominent, lateral veins conspicuous or faint, margins often ± undulate, apex pungent-pointed or acute with a mucro; 1 small gland near base; pulvinus to 0.5 mm long.", - "order": -1, - "source": null, - "original": null, - "uuid": "fe77daf4-c202-497e-aa5b-3a5ac739d058", - "editors": "", - "required": false, - "plainText": "Phyllodes lanceolate to narrowly elliptic, straight or slightly curved, 0.8–3 cm long, 2.5–7 mm wide, glabrous to hairy, midvein and marginal veins prominent, lateral veins conspicuous or faint, margins often ± undulate, apex pungent-pointed or acute with a mucro; 1 small gland near base; pulvinus to 0.5 mm long.", - "profile": { - "scientificName": "Acacia paradoxa", - "uuid": "bee218e6-e0a4-4b99-8c5e-e63a6e1b93aa", - "opus": { - "title": "NSW flora", - "uuid": "39295895-f9cd-4189-bc19-64bd46cd689b", - "shortName": null - } - } - }, - { - "creators": "P.G. Kodela", - "title": "Notes", - "text": "Frequently hybridises with a number of other acacias, particularly those of the Acacia verniciflua group and may be most closely related to this group. The name is from the Greek paradoxos, meaning strange, contrary to expectation, which may refer to this thorny, rather unattractive shrub being a showy plant when in full bloom (N. Hall & L.A.S. Johnson, The Names of Acacias of New South Wales, 1993).", - "order": -1, - "source": null, - "original": null, - "uuid": "17594f42-999c-46b6-9d2c-55966062b500", - "editors": "", - "required": false, - "plainText": "Frequently hybridises with a number of other acacias, particularly those of the Acacia verniciflua group and may be most closely related to this group. The name is from the Greek paradoxos, meaning strange, contrary to expectation, which may refer to this thorny, rather unattractive shrub being a showy plant when in full bloom (N. Hall & L.A.S. Johnson, The Names of Acacias of New South Wales, 1993).", - "profile": { - "scientificName": "Acacia paradoxa", - "uuid": "bee218e6-e0a4-4b99-8c5e-e63a6e1b93aa", - "opus": { - "title": "NSW flora", - "uuid": "39295895-f9cd-4189-bc19-64bd46cd689b", - "shortName": null - } - } - }, - { - "creators": "P.G. Kodela", - "title": "Supplied Taxonomy", - "text": "Fabaceae - Mimosoideae\nAcacia\nparadoxa", - "order": -1, - "source": null, - "original": null, - "uuid": "4329c90e-a596-45ea-93e6-7113dce9d4e4", - "editors": "", - "required": false, - "plainText": "Fabaceae - Mimosoideae\nAcacia\nparadoxa", - "profile": { - "scientificName": "Acacia paradoxa", - "uuid": "bee218e6-e0a4-4b99-8c5e-e63a6e1b93aa", - "opus": { - "title": "NSW flora", - "uuid": "39295895-f9cd-4189-bc19-64bd46cd689b", - "shortName": null - } - } - }, - { - "creators": "P.G. Kodela", - "title": "Synonyms", - "text": "Acacia armata R.Br.; Acacia microcantha A.Dietr.; Acacia ornithophora Sweet; Acacia tristis Graham; Mimosa armata (R.Br.) Poir.", - "order": -1, - "source": null, - "original": null, - "uuid": "bbfa6e32-a43b-43cb-a1fc-ab1b7f45219b", - "editors": "", - "required": false, - "plainText": "Acacia armata R.Br.; Acacia microcantha A.Dietr.; Acacia ornithophora Sweet; Acacia tristis Graham; Mimosa armata (R.Br.) Poir.", - "profile": { - "scientificName": "Acacia paradoxa", - "uuid": "bee218e6-e0a4-4b99-8c5e-e63a6e1b93aa", - "opus": { - "title": "NSW flora", - "uuid": "39295895-f9cd-4189-bc19-64bd46cd689b", - "shortName": null - } - } - }, - { - "creators": "P.G. Kodela", - "title": "Taxon Concept", - "text": "P.G. Kodela & G.J. Harden, Flora of NSW Vol. 2 (2002)", - "order": -1, - "source": null, - "original": null, - "uuid": "452aef95-e534-4888-a4bc-2f202f6cbbcf", - "editors": "", - "required": false, - "plainText": "P.G. Kodela & G.J. 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</band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_bhl.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_bhl.jrxml deleted file mode 100644 index a00661b6..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_bhl.jrxml +++ /dev/null @@ -1,182 +0,0 @@ - - - - - - - - - - - - - - - - - - - - <band height="17" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement x="0" y="0" width="515" height="17" isRemoveLineWhenBlank="true" uuid="d5c74560-6485-46d6-a0cc-4b08cd53546f"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Biodiversity Heritage Library References]]></text> - </staticText> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_bibliography.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_bibliography.jrxml deleted file mode 100644 index 576f38e2..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_bibliography.jrxml +++ /dev/null @@ -1,66 +0,0 @@ - - - - - - - - - - - - - - <band height="17" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement positionType="Float" x="0" y="0" width="515" height="17" isRemoveLineWhenBlank="true" uuid="d5c74560-6485-46d6-a0cc-4b08cd53546f"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Bibliography]]></text> - </staticText> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_conservation.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_conservation.jrxml deleted file mode 100644 index 32520506..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_conservation.jrxml +++ /dev/null @@ -1,65 +0,0 @@ - - - - - - - - - - - - - - - <band height="17" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement positionType="Float" x="0" y="0" width="515" height="17" isRemoveLineWhenBlank="true" uuid="483cae47-6eb0-4dc2-b87e-feb02b8a1075"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Conservation Status]]></text> - </staticText> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_images.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_images.jrxml deleted file mode 100644 index c873b6a5..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_images.jrxml +++ /dev/null @@ -1,135 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - <band height="17" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement positionType="Float" x="0" y="0" width="515" height="17" isRemoveLineWhenBlank="true" uuid="d5c74560-6485-46d6-a0cc-4b08cd53546f"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - <printWhenExpression><![CDATA[$P{showTitle}]]></printWhenExpression> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Images]]></text> - </staticText> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - Fig. ${$F{leftImage.imageNumber}}" + ($F{leftImage.metadata.title} ? ": '${$F{leftImage.metadata.title}}'" : "") + ($F{leftImage.metadata.title} ? new String($F{leftImage.metadata.creator}.asBoolean() ? " by ${$F{leftImage.metadata.creator}}" : "") : "") + ($F{leftImage.metadata.rightsHolder} ? new String($F{leftImage.metadata.rightsHolder}.asBoolean() ? " (© ${$F{leftImage.metadata.rightsHolder}})" : "") : "")]]> - - - - - - - - - - - - - - - - - - - - - - - - - Fig. ${$F{rightImage.imageNumber}}" + ($F{rightImage.metadata.title} ? ": '${$F{rightImage.metadata.title}}'" : "") + ($F{rightImage.metadata.title} ? new String($F{rightImage.metadata.creator}.asBoolean() ? " by ${$F{rightImage.metadata.creator}}" : "") : "") + ($F{rightImage.metadata.rightsHolder} ? new String($F{rightImage.metadata.rightsHolder}.asBoolean() ? " (© ${$F{rightImage.metadata.rightsHolder}})" : "") : "")]]> - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_key.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_key.jrxml deleted file mode 100644 index 16ccaa46..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_key.jrxml +++ /dev/null @@ -1,49 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - <band height="42" splitType="Stretch"> - <textField> - <reportElement positionType="Float" x="0" y="1" width="515" height="20" uuid="57682c8f-eff1-4b9e-801d-390735cda233"/> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <textFieldExpression><![CDATA[$F{projectName} + " " + $F{keyName} + " key"]]></textFieldExpression> - </textField> - <textField isStretchWithOverflow="true"> - <reportElement x="10" y="21" width="505" height="17" isRemoveLineWhenBlank="true" uuid="691e9582-8174-4840-a971-cf425767ae66"/> - <textElement markup="html"/> - <textFieldExpression><![CDATA[$F{source}]]></textFieldExpression> - </textField> - </band> - - - - - - - - )$P{REPORT_TEMPLATES}]]> - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_key_item.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_key_item.jrxml deleted file mode 100644 index d118fdb8..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_key_item.jrxml +++ /dev/null @@ -1,31 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_links.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_links.jrxml deleted file mode 100644 index 5df6fe61..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_links.jrxml +++ /dev/null @@ -1,70 +0,0 @@ - - - - - - - - - - - - - - - - <band height="17" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement positionType="Float" x="0" y="0" width="515" height="17" isRemoveLineWhenBlank="true" uuid="d5c74560-6485-46d6-a0cc-4b08cd53546f"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Links]]></text> - </staticText> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_map.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_map.jrxml deleted file mode 100644 index e7855cca..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_map.jrxml +++ /dev/null @@ -1,73 +0,0 @@ - - - - - - - - - - - - - - - - - - <band height="223" splitType="Stretch"> - <image scaleImage="RetainShape" hAlign="Center" vAlign="Middle" isLazy="true" hyperlinkType="Reference" hyperlinkTarget="Blank"> - <reportElement positionType="Float" x="270" y="4" width="257" height="216" isRemoveLineWhenBlank="true" uuid="8efb1cc8-2e61-4252-ab35-1112479234f8"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <box padding="2"> - <topPen lineWidth="1.0" lineStyle="Solid" lineColor="#ABABAB"/> - <leftPen lineWidth="1.0" lineStyle="Solid" lineColor="#ABABAB"/> - <bottomPen lineWidth="1.0" lineStyle="Solid" lineColor="#ABABAB"/> - <rightPen lineWidth="1.0" lineStyle="Solid" lineColor="#ABABAB"/> - </box> - <imageExpression><![CDATA[$F{mapImageUrl}]]></imageExpression> - <hyperlinkReferenceExpression><![CDATA[$F{occurrencesUrl}]]></hyperlinkReferenceExpression> - <hyperlinkWhenExpression><![CDATA[$F{occurrencesUrl} != null && $F{occurrencesUrl}.trim() != ""]]></hyperlinkWhenExpression> - </image> - <textField> - <reportElement x="1" y="3" width="259" height="217" uuid="c7a46b37-80ab-4587-b542-4ef5e57a6511"> - <printWhenExpression><![CDATA[Boolean.valueOf($F{text}.asBoolean())]]></printWhenExpression> - </reportElement> - <textElement markup="html"/> - <textFieldExpression><![CDATA[$F{text}]]></textFieldExpression> - </textField> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_nomenclature.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_nomenclature.jrxml deleted file mode 100644 index 5f9b57b2..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_nomenclature.jrxml +++ /dev/null @@ -1,77 +0,0 @@ - - - - - - - - - - - - - - - - - <band height="37" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement positionType="Float" x="0" y="0" width="515" height="17" uuid="90d40018-95a7-46ee-93a5-bb7e408dd432"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Nomenclature]]></text> - </staticText> - <textField isStretchWithOverflow="true" isBlankWhenNull="true"> - <reportElement x="10" y="21" width="480" height="15" isRemoveLineWhenBlank="true" uuid="35826d20-582f-425f-8519-e2bfd340140d"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement markup="html"/> - <textFieldExpression><![CDATA[$P{formattedName}]]></textFieldExpression> - </textField> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_specimens.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_specimens.jrxml deleted file mode 100644 index 71babf35..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_specimens.jrxml +++ /dev/null @@ -1,125 +0,0 @@ - - - - - - - - - - - - - - - - <band height="17" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement positionType="Float" x="0" y="0" width="515" height="17" isRemoveLineWhenBlank="true" uuid="d5c74560-6485-46d6-a0cc-4b08cd53546f"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Specimens]]></text> - </staticText> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_status.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_status.jrxml deleted file mode 100644 index 8e5354ea..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_status.jrxml +++ /dev/null @@ -1,64 +0,0 @@ - - - - - - - - - - - - - - - <band splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - </band> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_detail_taxonomy.jrxml b/grails-app/conf/reports/profiles/PROFILES_detail_taxonomy.jrxml deleted file mode 100644 index 641892e7..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_detail_taxonomy.jrxml +++ /dev/null @@ -1,67 +0,0 @@ - - - - - - - - - - - - - - - <band height="17" splitType="Stretch"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <staticText> - <reportElement positionType="Float" x="0" y="0" width="515" height="17" isRemoveLineWhenBlank="true" uuid="d5c74560-6485-46d6-a0cc-4b08cd53546f"> - <property name="com.jaspersoft.studio.unit.height" value="pixel"/> - <property name="com.jaspersoft.studio.unit.width" value="pixel"/> - </reportElement> - <textElement> - <font size="14" isBold="true"/> - </textElement> - <text><![CDATA[Taxonomy]]></text> - </staticText> - </band> - - - - - - - - - - - - - - - - - - - - - ${$F{rank}.toUpperCase()}: ${$F{scientificName}}"]]> - - - - - - - - - - - - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_styles.jrtx b/grails-app/conf/reports/profiles/PROFILES_styles.jrtx deleted file mode 100644 index 70a3b43c..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_styles.jrtx +++ /dev/null @@ -1,33 +0,0 @@ - - - - - - - - diff --git a/grails-app/conf/reports/profiles/PROFILES_toc.jrxml b/grails-app/conf/reports/profiles/PROFILES_toc.jrxml deleted file mode 100644 index 4f99a0ff..00000000 --- a/grails-app/conf/reports/profiles/PROFILES_toc.jrxml +++ /dev/null @@ -1,172 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - -
-
-
-
- -
-
-
- - - -
-
-
-

${record.profile.scientificName} ${record.profile.nameAuthor}

-
- -
- ${record.profile.authorship?.find { it.category == 'Author' }?.text ?: ""} -
- - - -
-

${attribute.title}

-
-

${raw(attribute.text)}

- - - Contributed by - - ${attribute.creators.join(', ')} - - - - - Edited by - - ${attribute.editors.join(', ')} - - - - -
-
-
-
- - -

Occurrences

- -
- - -

Conservation Status

-
    - -
  • ${status.regionAbbrev ?: 'IUCN'} ${status.rawStatus} -
  • -
    -
-
- - -
-

Taxonomy

-
    - -
  • ${classification.rank.capitalize()}: ${classification.scientificName}
  • -
    -
-
-
- - -

Nomenclature

- ${raw(record.profile.nomenclatureHtml)} -
- - -

Links

- -
- - -

Biodiversity Heritage Library References

- -

- Title: ${link.title}
- Description: ${link.description}
- BHL Title: ${link.fullTitle}
- Edition: ${link.edition}
- Publisher: ${link.publisher}
- DOI: ${link.doi}
-

-
-
- - -

Specimens

- -

- Institution Name: ${spec.institutionName}
- Collection: ${spec.collectionName}
- Catalog Number: ${spec.catalogNumber}
-

-
-
- - -

Images

-
- - - - - - - -
-
- - -

Bibliography

-
    - -
  • ${raw(bib.text)}
  • -
    -
-
- - -
-

${authorship.category}

- -

${authorship.text}

-
-
-
- -
- - - - - \ No newline at end of file diff --git a/grails-app/views/profile/_optionsMenu.gsp b/grails-app/views/profile/_optionsMenu.gsp index 1467d280..e4131b35 100644 --- a/grails-app/views/profile/_optionsMenu.gsp +++ b/grails-app/views/profile/_optionsMenu.gsp @@ -30,13 +30,6 @@ -
  • -   Export as PDF - -
  • diff --git a/grails-app/views/profile/_publications.gsp b/grails-app/views/profile/_publications.gsp index 4e2d4f94..c1b4d080 100644 --- a/grails-app/views/profile/_publications.gsp +++ b/grails-app/views/profile/_publications.gsp @@ -25,18 +25,4 @@ - - diff --git a/src/main/groovy/au/org/ala/profile/hub/reports/BackCoverImageRenderer.groovy b/src/main/groovy/au/org/ala/profile/hub/reports/BackCoverImageRenderer.groovy deleted file mode 100644 index 26e6b3ab..00000000 --- a/src/main/groovy/au/org/ala/profile/hub/reports/BackCoverImageRenderer.groovy +++ /dev/null @@ -1,195 +0,0 @@ -package au.org.ala.profile.hub.reports - - -import groovy.util.logging.Slf4j -import groovyx.gpars.dataflow.Dataflows -import net.sf.jasperreports.engine.JRException -import net.sf.jasperreports.engine.JasperReportsContext -import net.sf.jasperreports.renderers.AbstractRenderToImageDataRenderer - -import java.awt.* -import java.awt.geom.Dimension2D -import java.awt.geom.Rectangle2D -import java.awt.image.BufferedImage -import java.awt.image.ImageObserver - -import static java.lang.Math.round - -/** - * Renderer for the report back cover image. - * - * First it synchronously loads the image from the URL and at the same time, scales it to required width - * and height, preserving aspect ratio by centre cropping. - * - * At render time it will also desaturate each pixel and then apply a wash using the washColour. WashColour - * should have an alpha value at most 0.8. Wash colours alpha will then transition to 1.0 from gradientThreshold of - * the height to 1.0 of the height, so that the colour fades into the main background colour. - */ -@Slf4j -class BackCoverImageRenderer extends AbstractRenderToImageDataRenderer { - - private final BufferedImage bufferedImage - private final Color washColor - private final double gradientThreshold - private final int width - private final int height - - BackCoverImageRenderer(URL url, Color washColor, double gradientThreshold = 0.7, int width = 595, int height = 230) { - this.gradientThreshold = gradientThreshold - this.washColor = washColor - this.bufferedImage = create(url, new Dimension(width, height)) - this.width = width - this.height = height - } - - @Override - Dimension2D getDimension(JasperReportsContext jasperReportsContext) throws JRException { - return new Dimension(width, height) - } - - /** - * Takes the scaled image bytes and applies the desaturation, wash and gradient before painting the new image - * into the graphics context - * @param jasperReportsContext - * @param grx - * @param rectangle - * @throws JRException - */ - @Override - void render(JasperReportsContext jasperReportsContext, Graphics2D grx, Rectangle2D rectangle) throws JRException { - log.debug("BackCoverImageRenderer.render()") - def gradThresh = round(bufferedImage.height.toDouble() * gradientThreshold).toInteger() - def gradThreshD = gradThresh.toDouble() - def gradientHeight = (bufferedImage.height - gradThresh).toDouble() - def alphaRemaining = 255 - washColor.alpha - def alphaRemainingDouble = alphaRemaining.toDouble() - - for (int i = 0; i < bufferedImage.width; ++i) { - for (int j = 0; j < bufferedImage.height; ++j) { - def colour = bufferedImage.getRGB(i, j) - def c = new Color(colour, true) - def fgd - if (j > gradThresh) { - def alphaDelta = alphaRemainingDouble * ((j.toDouble() - gradThreshD) / gradientHeight) - def newAlpha = ColourUtils.clamp(washColor.alpha + round(alphaDelta).toInteger()) - - fgd = ColourUtils.withAlpha(washColor, newAlpha) - } else { - fgd = washColor - } - def c2 = ColourUtils.blend(fgd, ColourUtils.asLuminosity(c)) - bufferedImage.setRGB(i,j, c2.getRGB()) - } - } - - grx.paint = new TexturePaint(bufferedImage, new Rectangle(bufferedImage.width, bufferedImage.height)) -// g2d.paint = TexturePaint(image, Rectangle(image.width, image.height)) - grx.fillRect(0, 0, width, height) - } - - /** - * Load and scale the image to the required size using the method from - * https://javagraphics.blogspot.com.au/2011/05/images-scaling-jpegs-and-pngs.html - * - * @param url - * @param maxSize - * @return - * @throws Throwable - */ - BufferedImage create(URL url, Dimension maxSize) throws Throwable { - Image image = Toolkit.getDefaultToolkit().createImage(url) - - // Could also do this with Java 8 CompletableFutures - final def df = new Dataflows() -// CompletableFuture widthFuture = new CompletableFuture<>() - - def initWidth = image.getWidth(new ImageObserver() { - @Override - boolean imageUpdate(Image img, int infoflags, int x, int y, int width, int height) { - - def error = (infoflags & ERROR) != 0 - def abort = (infoflags & ABORT) != 0 - - if (error || abort) { -// widthFuture.completeExceptionally(new IOException()) - df.width = -1 - return false - } - - def finished = (infoflags & WIDTH) != 0 -// widthFuture.complete(width) - df.width = width - return !finished - } - }) - - if (initWidth != -1) { - df.width = initWidth -// widthFuture.complete(initWidth) - } - -// CompletableFuture heightFuture = new CompletableFuture<>() - def initHeight = image.getHeight(new ImageObserver() { - @Override - boolean imageUpdate(Image img, int infoflags, int x, int y, int width, int height) { - - def error = (infoflags & ERROR) != 0 - def abort = (infoflags & ABORT) != 0 - - if (error || abort) { -// heightFuture.completeExceptionally(new IOException()) - df.height = -1 - return false - } - - def finished = (infoflags & HEIGHT) != 0 -// heightFuture.complete(height) - df.height = height - return !finished - } - }) - - if (initHeight != -1) { -// heightFuture.complete(initHeight) - df.height = initHeight - } - -// def imageWidth = widthFuture.join() -// def imageHeight = heightFuture.join() - int imageWidth = df.width - int imageHeight = df.height - if (imageWidth == -1 || imageHeight == -1) { - throw new IOException("Couldn't read width ($imageWidth) or height ($imageHeight) from $url") - } - def maxWidth = maxSize.width.toInteger() - def maxHeight = maxSize.height.toInteger() - - BufferedImage thumbnail = new BufferedImage(maxWidth, maxHeight, BufferedImage.TYPE_INT_ARGB) - Graphics2D g = thumbnail.createGraphics() - if (imageWidth != maxWidth || imageHeight != maxHeight) { - def widthPct = maxWidth.toDouble() / imageWidth.toDouble() - def heightPct = maxHeight.toDouble() / imageHeight.toDouble() - - def scalePct = Math.max(widthPct, heightPct) - g.scale(scalePct, scalePct) - - def scaledWidth = imageWidth * scalePct - def scaledHeight = imageHeight * scalePct - - // centre scaled image - def startX = round((scaledWidth - maxWidth) / 2).toInteger() - def startY = round((scaledHeight - maxHeight) / 2).toInteger() - g.translate(-startX, -startY) - } - - g.setRenderingHint(RenderingHints.KEY_INTERPOLATION, RenderingHints.VALUE_INTERPOLATION_BILINEAR) - g.setRenderingHint(RenderingHints.KEY_ANTIALIASING, RenderingHints.VALUE_ANTIALIAS_ON) - while (!g.drawImage(image, 0, 0, null)); - g.dispose() - - image.flush() - - return thumbnail - } - -} diff --git a/src/main/groovy/au/org/ala/profile/hub/reports/GradientRenderer.groovy b/src/main/groovy/au/org/ala/profile/hub/reports/GradientRenderer.groovy deleted file mode 100644 index 7405fc27..00000000 --- a/src/main/groovy/au/org/ala/profile/hub/reports/GradientRenderer.groovy +++ /dev/null @@ -1,59 +0,0 @@ -package au.org.ala.profile.hub.reports - - -import groovy.util.logging.Slf4j -import net.sf.jasperreports.engine.JRException -import net.sf.jasperreports.engine.JasperReportsContext -import net.sf.jasperreports.renderers.AbstractRenderToImageDataRenderer - -import java.awt.* -import java.awt.geom.Dimension2D -import java.awt.geom.Rectangle2D - -import static java.awt.MultipleGradientPaint.CycleMethod.NO_CYCLE - -/** - * Renders a gradient from a start colour to transparent like so: - * COLOUR --33%--> COLOUR --100%--> COLOUR_WITH_ALPHA_0 - */ -@Slf4j -class GradientRenderer extends AbstractRenderToImageDataRenderer { - - private static final Color TRANSPARENT = new Color(0,0,0,0) - - private static final int DEFAULT_WIDTH = 595 - private static final int DEFAULT_HEIGHT = 185 - - private final int width - private final int height - - GradientRenderer(Color startColor, int width = DEFAULT_WIDTH, int height = DEFAULT_HEIGHT) { - this.startColor = startColor - this.width = width - this.height = height - } - - GradientRenderer(String startColor, int width = DEFAULT_WIDTH, int height = DEFAULT_HEIGHT) { - this(new ColourParser().decodeColorWithDefault(startColor, Color.WHITE), width, height) - } - - Color startColor - - @Override - Dimension2D getDimension(JasperReportsContext jasperReportsContext) throws JRException { - return new Dimension(width, height) - } - - @Override - void render(JasperReportsContext jasperReportsContext, Graphics2D g2d, Rectangle2D rect) throws JRException { - log.debug("GradientRenderer.render() from $startColor") - g2d.background = TRANSPARENT - def transparentStartColor = new Color(startColor.red, startColor.green, startColor.blue, 0) - log.debug("GradientRenderer.render() to $transparentStartColor") - final float[] fractions = [ 0f, 0.33f, 1.0f ] - final Color[] colors = [ startColor, startColor, transparentStartColor] - g2d.paint = new LinearGradientPaint(0f, 0f, rect.width.toFloat(), 0f, fractions, colors, NO_CYCLE) - - g2d.fillRect(0, 0, rect.width.toInteger(), rect.height.toInteger()) - } -} diff --git a/src/main/groovy/au/org/ala/profile/hub/reports/JasperExportFormat.groovy b/src/main/groovy/au/org/ala/profile/hub/reports/JasperExportFormat.groovy deleted file mode 100644 index 87989ecf..00000000 --- a/src/main/groovy/au/org/ala/profile/hub/reports/JasperExportFormat.groovy +++ /dev/null @@ -1,123 +0,0 @@ -package au.org.ala.profile.hub.reports - -import net.sf.jasperreports.engine.JRExporter -import net.sf.jasperreports.engine.export.JRCsvExporter -import net.sf.jasperreports.engine.export.JRCsvExporterParameter -import net.sf.jasperreports.engine.export.JRHtmlExporter -import net.sf.jasperreports.engine.export.JRHtmlExporterParameter -import net.sf.jasperreports.engine.export.JRPdfExporter -import net.sf.jasperreports.engine.export.JRPdfExporterParameter -import net.sf.jasperreports.engine.export.JRRtfExporter -import net.sf.jasperreports.engine.export.JRTextExporter -import net.sf.jasperreports.engine.export.JRTextExporterParameter -import net.sf.jasperreports.engine.export.JRXlsExporter -import net.sf.jasperreports.engine.export.JRXlsExporterParameter -import net.sf.jasperreports.engine.export.JRXmlExporter -import net.sf.jasperreports.engine.export.JRXmlExporterParameter -import net.sf.jasperreports.engine.export.oasis.JROdsExporter -import net.sf.jasperreports.engine.export.oasis.JROdtExporter -import net.sf.jasperreports.engine.export.ooxml.JRDocxExporter -import net.sf.jasperreports.engine.export.ooxml.JRDocxExporterParameter -import net.sf.jasperreports.engine.export.ooxml.JRPptxExporter -import net.sf.jasperreports.engine.export.ooxml.JRXlsxExporter - -import java.lang.reflect.Field - -/** - * The supported file formats with their mimetype and file extension. - * - * This is directly imported from the old Jasper plugin - * - * TODO Replace all deprecated code - * - * @author Sebastian Hohns - */ -enum JasperExportFormat implements Serializable { - PDF_FORMAT("application/pdf", "pdf", false), - HTML_FORMAT("text/html", "html", true), - XML_FORMAT("text/xml", "xml", false), - CSV_FORMAT("text/csv", "csv", false), - XLS_FORMAT("application/vnd.ms-excel", "xls", false), - RTF_FORMAT("text/rtf", "rtf", false), - TEXT_FORMAT("text/plain", "txt", true), - ODT_FORMAT("application/vnd.oasis.opendocument.text", "odt", false), - ODS_FORMAT("application/vnd.oasis.opendocument.spreadsheetl", "ods", false), - DOCX_FORMAT("application/vnd.openxmlformats-officedocument.wordprocessingml.document", "docx", false), - XLSX_FORMAT("application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "xlsx", false), - PPTX_FORMAT("application/vnd.openxmlformats-officedocument.presentationml.presentation", "pptx", false) - - String mimeTyp - String extension - boolean inline - - private JasperExportFormat(String mimeTyp, String extension, boolean inline) { - this.mimeTyp = mimeTyp - this.extension = extension - this.inline = inline - } - - /** - * Return the JasperExportFormat for a given format string. - * @param format as String - * @return JasperExportFormat - */ - static JasperExportFormat determineFileFormat(String format) { - switch (format) { - case "PDF": return JasperExportFormat.PDF_FORMAT - case "HTML": return JasperExportFormat.HTML_FORMAT - case "XML": return JasperExportFormat.XML_FORMAT - case "CSV": return JasperExportFormat.CSV_FORMAT - case "XLS": return JasperExportFormat.XLS_FORMAT - case "RTF": return JasperExportFormat.RTF_FORMAT - case "TEXT": return JasperExportFormat.TEXT_FORMAT - case "ODT": return JasperExportFormat.ODT_FORMAT - case "ODS": return JasperExportFormat.ODS_FORMAT - case "DOCX": return JasperExportFormat.DOCX_FORMAT - case "XLSX": return JasperExportFormat.XLSX_FORMAT - case "PPTX": return JasperExportFormat.PPTX_FORMAT - default: throw new Exception(message(code: "jasper.controller.invalidFormat", args: [format])) - } - } - - /** - * Return the suitable Exporter for a given file format. - * @param format - * @return exporter - */ - static JRExporter getExporter(JasperExportFormat format) { - switch (format) { - case PDF_FORMAT: return new JRPdfExporter() - case HTML_FORMAT: return new JRHtmlExporter() - case XML_FORMAT: return new JRXmlExporter() - case CSV_FORMAT: return new JRCsvExporter() - case XLS_FORMAT: return new JRXlsExporter() - case RTF_FORMAT: return new JRRtfExporter() - case TEXT_FORMAT: return new JRTextExporter() - case ODT_FORMAT: return new JROdtExporter() - case ODS_FORMAT: return new JROdsExporter() - case DOCX_FORMAT: return new JRDocxExporter() - case XLSX_FORMAT: return new JRXlsxExporter() - case PPTX_FORMAT: return new JRPptxExporter() - default: throw new Exception(message(code: "jasper.controller.invalidFormat", args: [format])) - } - } - - /** - * Return the available Fields for a given JasperExportFormat. - * @param format - * @return Field[] , null if no fields are available for the format - */ - static Field[] getExporterFields(JasperExportFormat format) { - switch (format) { - case PDF_FORMAT: return JRPdfExporterParameter.getFields() - case HTML_FORMAT: return JRHtmlExporterParameter.getFields() - case XML_FORMAT: return JRXmlExporterParameter.getFields() - case CSV_FORMAT: return JRCsvExporterParameter.getFields() - case XLS_FORMAT: return JRXlsExporterParameter.getFields() - case XLSX_FORMAT: return JRXlsExporterParameter.getFields() - case RTF_FORMAT: return JRTextExporterParameter.getFields() - case DOCX_FORMAT: return JRDocxExporterParameter.getFields() - default: return null - } - } -} \ No newline at end of file diff --git a/src/main/groovy/au/org/ala/profile/hub/reports/JasperReportDef.groovy b/src/main/groovy/au/org/ala/profile/hub/reports/JasperReportDef.groovy deleted file mode 100644 index 86ca67c7..00000000 --- a/src/main/groovy/au/org/ala/profile/hub/reports/JasperReportDef.groovy +++ /dev/null @@ -1,140 +0,0 @@ -package au.org.ala.profile.hub.reports - -import net.sf.jasperreports.engine.JRDataSource -import net.sf.jasperreports.engine.JasperPrint - -import org.apache.commons.io.FilenameUtils -import grails.util.Holders -import org.springframework.core.io.FileSystemResource -import org.springframework.core.io.Resource - -/** - * An abstract representation of a Jasper report. - *

    - * It contains the location of the report design file (name and folder) and - * data(reportData and/or parameters) needed to fill the report. - * - * This is directly imported from the old Jasper plugin - * - * TODO Replace all deprecated code - * - * @author Sebastian Hohns 2010 - */ -class JasperReportDef implements Serializable { - - /** - * The name of the report file without extension. - *

    - * The file can be in jrxml- or jasper-format. - */ - String name - - /** - * The parent folder of the report file. - *

    - * This can be an absolute path or an relative path based on class path. - */ - String folder - - /** - * The data source used to fill the report. - *

    - * This is a list of java beans. - */ - Collection reportData - - /** - * The actual data source used to fill the report. - *

    - * This is an implementation of {@link JRDataSource}. - */ - JRDataSource dataSource - - /** - * The target file format. - */ - JasperExportFormat fileFormat = JasperExportFormat.PDF_FORMAT - - /** - * The generated report as OutputStream. - */ - ByteArrayOutputStream contentStream - - /** - * Additional parameters. - */ - Map parameters = [:] - - /** - * Locale setting. - */ - Locale locale - - JasperPrint jasperPrinter - - private getApplicationContext() { - return Holders.grailsApplication.mainContext - } - - /** - * Looks for the report file in the filesystem. The file extension can either be .jasper - * or .jrxml. if japser.compile.files is set to true the report will be compiled and stored - * in the same folder as the jrxml file. - * @return the report as Resource - * @throws Exception , report file not found - */ - Resource getReport() { - String path = getFilePath() - - Resource result = getApplicationContext().getResource(path + ".jasper") - if (result.exists()) { - return result - } - - result = new FileSystemResource(path + ".jasper") - if (result.exists()) { - return result - } - - result = getApplicationContext().getResource(path + ".jrxml") - if (result.exists()) { - return result - } - - result = new FileSystemResource(path + ".jrxml") - if (result.exists()) { - return result - } - - throw new Exception("No such report spec: ${path} (jasper or .jrxml)") - } - - /** - * Return the file path. The filepath can be set per file (highest priority) or based on - * the jasper.dir.reports setting. Defaults to /report. - * @return full path to the report, without extension - */ - String getFilePath() { - if (folder) { - return folder + File.separator + FilenameUtils.getPath(name) + FilenameUtils.getBaseName(name) - } - if (Holders.config.jasper.dir.reports) { - return Holders.config.jasper.dir.reports + File.separator + FilenameUtils.getPath(name) + FilenameUtils.getBaseName(name) - } - return "/reports" + File.separator + FilenameUtils.getPath(name) + FilenameUtils.getBaseName(name) - } - - void setFilePath(String path) { - folder = FilenameUtils.getPath(path) - name = FilenameUtils.getName(path) - } - - /** - * Add a parameter to the parameter map. - * @param key , the key - * @param value , the value - */ - void addParameter(key, value) { - parameters.put(key, value) - } -} diff --git a/src/test/groovy/au/org/ala/profile/filter/AccessControlInterceptorSpec.groovy b/src/test/groovy/au/org/ala/profile/filter/AccessControlInterceptorSpec.groovy index 1ca0a589..11c7d1f5 100644 --- a/src/test/groovy/au/org/ala/profile/filter/AccessControlInterceptorSpec.groovy +++ b/src/test/groovy/au/org/ala/profile/filter/AccessControlInterceptorSpec.groovy @@ -412,13 +412,11 @@ class AccessControlInterceptorSpec extends Specification implements InterceptorU // unless we manually add the dummy controller class used in this test grailsApplication.addArtefact("Controller", ProfileController) ProfileService pService = Mock(ProfileService) - ExportService eService = Mock(ExportService) ImageService iService = Mock(ImageService) MapService mService = Mock(MapService) defineBeans { authService(MockAuthService) profileService(InstanceFactoryBean, pService, ProfileService) - exportService(InstanceFactoryBean, eService, ExportService) mapService(InstanceFactoryBean, mService, MapService) imageService(InstanceFactoryBean, iService, ImageService) delegateService(MockDelegateService) @@ -437,7 +435,6 @@ class AccessControlInterceptorSpec extends Specification implements InterceptorU pService.createProfile(*_) >> wsResponse pService.archiveProfile(*_) >> wsResponse pService.toggleDraftMode(*_) >> wsResponse - pService.savePublication(*_) >> wsResponse pService.updateAttribute(*_) >> wsResponse pService.renameProfile(*_) >> wsResponse pService.deleteAttribute(*_) >> wsResponse @@ -453,7 +450,6 @@ class AccessControlInterceptorSpec extends Specification implements InterceptorU mService.getSnapshotImageUrlWithUUIDs(*_) >> wsResponse mService.createMapSnapshot(*_) >> null mService.deleteMapSnapshot(*_) >> null - eService.createPdf(*_) >> null controller = new ProfileController() controller.profileService = pService @@ -694,14 +690,6 @@ class AccessControlInterceptorSpec extends Specification implements InterceptorU "publishDraft" | "AUTHOR" | 403 "publishDraft" | "ADMIN" | 200 "publishDraft" | "ALA_ADMIN" | 200 - // create profile snapshot - "savePublication" | "NOT_LOGGED_IN_USER" | 403 - "savePublication" | "LOGGED_IN_USER" | 403 - "savePublication" | "REVIEWER" | 403 - "savePublication" | "EDITOR" | 403 - "savePublication" | "AUTHOR" | 403 - "savePublication" | "ADMIN" | 200 - "savePublication" | "ALA_ADMIN" | 200 } void "check to ensure users with correct privilege can comment on a profile"() { diff --git a/src/test/groovy/au/org/ala/profile/hub/ExportServiceSpec.groovy b/src/test/groovy/au/org/ala/profile/hub/ExportServiceSpec.groovy deleted file mode 100644 index f1180a54..00000000 --- a/src/test/groovy/au/org/ala/profile/hub/ExportServiceSpec.groovy +++ /dev/null @@ -1,64 +0,0 @@ -package au.org.ala.profile.hub - - -import grails.testing.services.ServiceUnitTest -import spock.lang.Specification -import spock.lang.Unroll -/** - * See the API for {@link grails.testing.services.ServiceUnitTest} for usage instructions - */ -class ExportServiceSpec extends Specification implements ServiceUnitTest { - - def setup() { - } - - def cleanup() { - } - - @Unroll - def "test html text clean up"() { - expect: - service.stripTextFromNonFormattingHtmlTags(html) == cleanHtml - - where: - html | cleanHtml - "nomenclatural synonym: Mimosa paradoxa (DC.) Poir." | "nomenclatural synonym: Mimosa paradoxa (DC.) Poir." - "taxonomic synonym: Racosperma undulata (Willd. ex H.L.Wendl.) Mart." | "taxonomic synonym: Racosperma undulata (Willd. ex H.L.Wendl.) Mart." - "doubtful taxonomic synonym: Acacia undulata var. longispina Hort. ex Vis." | "doubtful taxonomic synonym: Acacia undulata var. longispina Hort. ex Vis." - } - - @Unroll - def "test status text formatting"() { - expect: - service.formatStatusText(before) == after - - where: - before | after - "Inflorescence_arrangement" | "Inflorescence arrangement" - "pca1" | "Pca1" - "precip_seasonality" | "Precip seasonality" - } - - @Unroll - def "test attribute text formatting"() { - expect: - service.formatAttributeText(text, title) == formattedText - - where: - text | title | formattedText - "kangaroo thorn, hedge wattle" | "Common Name" | "Common Name: kangaroo thorn, hedge wattle" - "

    kangaroo thorn, hedge wattle

    " | "Common Name" | "

    Common Name: kangaroo thorn, hedge wattle

    " - "
    1. July–November.
    " | "Flowering" | "

    Flowering:

    1. July–November.
    " - } - - @Unroll - def "test Jasper element conversion"() { - expect: - ExportService.convertTagsForJasper(text) == formattedText - - where: - text | formattedText - '

    Common Name:

    strong em text em

    something

    ' | '

    Common Name:

    strong em text em

    something

    ' - } - -} diff --git a/src/test/js/specs/controllers/ReportControllerSpec.js b/src/test/js/specs/controllers/ReportControllerSpec.js deleted file mode 100644 index d5c52baa..00000000 --- a/src/test/js/specs/controllers/ReportControllerSpec.js +++ /dev/null @@ -1,118 +0,0 @@ -describe("ReportController tests", function () { - var controller; - var scope; - var messageService; - var profileService; - var util = { - getQueryParameter: function (param) { - }, - confirm: function (msg) { - }, - getEntityId: function (entity) { - return "1234" - } - }; - var config; - var loadReportDefer; - - var getReportResponse = '{"recordCount":10961,"records":[{"editor":"Unknown","scientificName":"Acetosa","profileId":"32a56222-596d-4da3-b299-d9e423f36d51","lastUpdated":"2015-07-03T04:03:04Z"},{"editor":null,"scientificName":"Abelia x grandiflora","profileId":"f9388454-1b1a-4acb-b0f0-c8e25d722ec5","lastUpdated":"2015-07-03T03:51:30Z"}]}'; - - beforeAll(function () { - console.log("****** Report Controller Tests ******"); - }); - afterAll(function () { - console.log("----------------------------"); - }); - - beforeEach(module('profileEditor')); - - beforeEach(inject(function ($controller, $rootScope, _profileService_, $q, _messageService_) { - scope = $rootScope.$new(); - profileService = _profileService_; - messageService = jasmine.createSpyObj('_messageService_', ["success", "info", "alert", "pop"]); - - loadReportDefer = $q.defer(); - - spyOn(profileService, "loadReport").and.returnValue(loadReportDefer.promise); - - controller = $controller("ReportController as reportCtrl", { - $scope: scope, - profileService: profileService, - util: util, - config: {}, - messageService: messageService - }); - - controller.selectedReport = scope.reportCtrl.reports[2]; - })); - - it("when dates are reset", function () { - scope.reportCtrl.dates.to = new Date(); - scope.reportCtrl.dates.from = new Date(); - - scope.reportCtrl.clearDates(); - - expect(scope.reportCtrl.dates.to).toBeUndefined(); - expect(scope.reportCtrl.dates.from).toBeUndefined(); - }); - - it("should load recent updates report", function () { - var reportId = scope.reportCtrl.reports[2].id; - - loadReportDefer.resolve(JSON.parse(getReportResponse)) - scope.reportCtrl.loadReport(reportId, 0); - // this is a must to have applied the above result - scope.$apply() - - expect(profileService.loadReport).toHaveBeenCalled(); - expect(scope.reportCtrl.reportData).toBeDefined(); - expect(scope.reportCtrl.reportData['recordCount']).toBe(10961); - }); - - it("when period is today, last30Days or last7Days - should call loadReport", function () { - var periods = scope.reportCtrl.periods; - scope.reportCtrl.selectedReport = scope.reportCtrl.reports[2]; - spyOn(scope.reportCtrl, "loadReport"); - - loadReportDefer.resolve(JSON.parse(getReportResponse)); - scope.reportCtrl.setPeriod(periods[0]); - // this is a must to have applied the above result - scope.$apply(); - expect(scope.reportCtrl.loadReport).toHaveBeenCalled(); - - // last7Days - scope.reportCtrl.loadReport.calls.reset(); - loadReportDefer.resolve(JSON.parse(getReportResponse)); - scope.reportCtrl.setPeriod(periods[1]); - // this is a must to have applied the above result - scope.$apply(); - expect(scope.reportCtrl.loadReport).toHaveBeenCalled(); - - // last30Days - scope.reportCtrl.loadReport.calls.reset(); - loadReportDefer.resolve(JSON.parse(getReportResponse)); - scope.reportCtrl.setPeriod(periods[2]); - // this is a must to have applied the above result - scope.$apply(); - expect(scope.reportCtrl.loadReport).toHaveBeenCalled(); - }); - - it("when period is custom - should only call loadReport when customLoadReport is called", function () { - var periods = scope.reportCtrl.periods; - spyOn(scope.reportCtrl, "loadReport"); - - loadReportDefer.resolve(JSON.parse(getReportResponse)); - scope.reportCtrl.setPeriod(periods[3]); - // this is a must to have applied the above result - scope.$apply(); - expect(scope.reportCtrl.loadReport.calls.count()).toBe(0); - - // now call customLoadReport - scope.reportCtrl.dates.to = new Date(); - scope.reportCtrl.dates.from = new Date(); - scope.reportCtrl.loadCustomDateReport(); - // this is a must to have applied the above result - scope.$apply(); - expect(scope.reportCtrl.loadReport).toHaveBeenCalled(); - }); -}); \ No newline at end of file