error in pipeline-docker.md

[maryam95hallal]

Their is an error or something missing from the dockerfile
I have used your instruction on how to create a docker image from conda environment file yet that error appear.
my dockerfile is the folder I selected as my workdir in the docker file.

executor failed running [/bin/sh -c conda env update -n root -f LTDSE.yml && conda clean -a]: exit code: 1

FROM continuumio/miniconda
WORKDIR /home/pc/Desktop/tracking frameworks/LTDSE_ENV
COPY LTDSE.yaml .
RUN \
   conda env update -n root -f LTDSE.yml \
&& conda clean -a

[maryam95hallal]

This is a working example on how to create and activate conda from dockerfile, yet I have a problem with environment paths (path of numpy and scipy is not setted after installation from dockerfile

FROM continuumio/miniconda

WORKDIR /home/pc/Desktop/docker_LTDSE/src

COPY src/ .

RUN conda env create -f LTDSE.yaml

# Make RUN commands use the new environment:
SHELL ["conda", "run", "--no-capture-output", "-n", "LTDSE", "/bin/bash", "-c"]

EXPOSE 5003
# The code to run when container is started:
ENTRYPOINT ["conda", "run", "--no-capture-output", "-n", "LTDSE", "python3", "src/LT_DSE_Demo.py"]

the error generated:
#failed error in 1108.5 Building wheel for pycocotools (setup.py): finished with status 'error',
pycocotools needs numpy and scipy to work.