From 44d74d7366f9d7c6ee20ed451770e72c68978b73 Mon Sep 17 00:00:00 2001
From: jtyoung84 <104453205+jtyoung84@users.noreply.github.com>
Date: Mon, 18 Mar 2024 15:59:39 -0700
Subject: [PATCH] ci: adds costum install script for Go

---
 .github/workflows/tag_and_publish.yml | 56 ++++++++++++++-------------
 1 file changed, 30 insertions(+), 26 deletions(-)

diff --git a/.github/workflows/tag_and_publish.yml b/.github/workflows/tag_and_publish.yml
index eb975cf..04dd412 100644
--- a/.github/workflows/tag_and_publish.yml
+++ b/.github/workflows/tag_and_publish.yml
@@ -65,41 +65,45 @@ jobs:
       SERVICE_TOKEN: ${{ secrets.SERVICE_TOKEN }}
   publish:
     runs-on: ubuntu-latest
+    env:
+      GO_VERSION: '1.14.12'
+      GO_OS: 'linux'
+      GO_ARCH: 'amd64'
+      SINGULARITY_VERSION: '3.7.0'
     needs: tag
     steps:
       - uses: actions/checkout@v3
       - name: Pull latest changes
         run: git pull origin main
-      - name: Set up Go 1.14
-        uses: actions/setup-go@v1
-        with:
-          go-version: 1.14
-        id: go
-      - name: Install Dependencies
+      - name: Install dependencies
         run: |
           sudo apt-get update && sudo apt-get install -y \
-            build-essential \
-            libssl-dev \
-            uuid-dev \
-            libgpgme11-dev \
-            squashfs-tools \
-            libseccomp-dev \
-            pkg-config
+          build-essential \
+          libssl-dev \
+          uuid-dev \
+          libgpgme11-dev \
+          squashfs-tools \
+          libseccomp-dev \
+          wget \
+          pkg-config \
+          procps
+      - name: Install GO
+        run: |
+          wget https://dl.google.com/go/go$GO_VERSION.$GO_OS-$GO_ARCH.tar.gz
+          tar -C /usr/local -xzvf go$GO_VERSION.$GO_OS-$GO_ARCH.tar.gz
+          rm go$GO_VERSION.$GO_OS-$GO_ARCH.tar.gz
+          echo 'export PATH=$PATH:/usr/local/go/bin' | tee -a /etc/profile
       - name: Install Singularity
-        env:
-          SINGULARITY_VERSION: 3.7.0
-          GOPATH: /tmp/go
         run: |
-          mkdir -p $GOPATH
-          sudo mkdir -p /usr/local/var/singularity/mnt && \
-          mkdir -p $GOPATH/src/github.com/sylabs && \
-          cd $GOPATH/src/github.com/sylabs && \
-          wget -qO- https://github.com/sylabs/singularity/releases/download/v${SINGULARITY_VERSION}/singularity-ce-${SINGULARITY_VERSION}.tar.gz | \
-          tar xzv && \
-          cd singularity-ce-${SINGULARITY_VERSION} && \
-          ./mconfig -p /usr/local && \
-          make -C builddir && \
-          sudo make -C builddir install
+          wget https://github.com/hpcng/singularity/releases/download/v${SINGULARITY_VERSION}/singularity-${SINGULARITY_VERSION}.tar.gz
+          tar -xzf singularity-${SINGULARITY_VERSION}.tar.gz
+          rm singularity-${SINGULARITY_VERSION}.tar.gz
+          export PATH=$PATH:/usr/local/go/bin
+          cd singularity
+          ./mconfig --without-suid
+          make -C ./builddir
+          sudo make -C ./builddir install
+          cd ..
       - name: Build sif container
         run: |
           mkdir aind-data-transformation/build