diff --git a/docs/first-order/test_2p_responses.ipynb b/docs/first-order/test_2p_responses.ipynb index d3a0afbe..73345a8d 100644 --- a/docs/first-order/test_2p_responses.ipynb +++ b/docs/first-order/test_2p_responses.ipynb @@ -153,31 +153,6 @@ { "cell_type": "code", "execution_count": 5, - "id": "98daca8f", - "metadata": {}, - "outputs": [ - { - "data": { - "text/plain": [ - "DfOverF pynwb.ophys.DfOverF at 0x1856046442816\n", - "Fields:\n", - " roi_response_series: {\n", - " imaging_plane_1 \n", - " }" - ] - }, - "execution_count": 5, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "nwb.processing[\"ophys\"][\"DfOverF\"]" - ] - }, - { - "cell_type": "code", - "execution_count": 6, "id": "a8cbffdf", "metadata": {}, "outputs": [ @@ -221,7 +196,7 @@ }, { "cell_type": "code", - "execution_count": 7, + "execution_count": 6, "id": "f5163658", "metadata": {}, "outputs": [], @@ -231,7 +206,7 @@ }, { "cell_type": "code", - "execution_count": 8, + "execution_count": 7, "id": "534e344c", "metadata": {}, "outputs": [ @@ -251,7 +226,7 @@ }, { "cell_type": "code", - "execution_count": 9, + "execution_count": 8, "id": "8308224d", "metadata": {}, "outputs": [ @@ -290,7 +265,7 @@ }, { "cell_type": "code", - "execution_count": 10, + "execution_count": 9, "id": "6177ffb0", "metadata": {}, "outputs": [ @@ -309,7 +284,7 @@ }, { "cell_type": "code", - "execution_count": 11, + "execution_count": 10, "id": "557ad65d", "metadata": {}, "outputs": [], @@ -332,7 +307,7 @@ }, { "cell_type": "code", - "execution_count": 12, + "execution_count": 11, "id": "c103ac82", "metadata": {}, "outputs": [], @@ -347,7 +322,7 @@ }, { "cell_type": "code", - "execution_count": 13, + "execution_count": 12, "id": "500e70c6", "metadata": { "tags": [ @@ -471,7 +446,7 @@ "9 27.625847 27.642543 0 spontaneous" ] }, - "execution_count": 13, + "execution_count": 12, "metadata": {}, "output_type": "execute_result" } @@ -483,7 +458,7 @@ }, { "cell_type": "code", - "execution_count": 14, + "execution_count": 13, "id": "0b89795c", "metadata": {}, "outputs": [ @@ -506,7 +481,7 @@ " 'spontaneous'}" ] }, - "execution_count": 14, + "execution_count": 13, "metadata": {}, "output_type": "execute_result" } @@ -517,7 +492,7 @@ }, { "cell_type": "code", - "execution_count": 15, + "execution_count": 14, "id": "abd73a5c", "metadata": {}, "outputs": [ @@ -527,7 +502,7 @@ "10" ] }, - "execution_count": 15, + "execution_count": 14, "metadata": {}, "output_type": "execute_result" } @@ -561,7 +536,7 @@ }, { "cell_type": "code", - "execution_count": 16, + "execution_count": 15, "id": "ae73905f", "metadata": {}, "outputs": [], @@ -572,7 +547,7 @@ }, { "cell_type": "code", - "execution_count": 17, + "execution_count": 16, "id": "9cae90bb", "metadata": {}, "outputs": [ @@ -625,7 +600,7 @@ }, { "cell_type": "code", - "execution_count": 18, + "execution_count": 17, "id": "fd0bf83b", "metadata": {}, "outputs": [], @@ -654,7 +629,7 @@ }, { "cell_type": "code", - "execution_count": 19, + "execution_count": 18, "id": "21a363be", "metadata": {}, "outputs": [], @@ -711,7 +686,7 @@ }, { "cell_type": "code", - "execution_count": 20, + "execution_count": 19, "id": "85c95386", "metadata": {}, "outputs": [ @@ -728,7 +703,7 @@ "Text(0, 0.5, 'ROI (neuron)')" ] }, - "execution_count": 20, + "execution_count": 19, "metadata": {}, "output_type": "execute_result" }, @@ -765,7 +740,7 @@ }, { "cell_type": "code", - "execution_count": 21, + "execution_count": 20, "id": "fa14050c", "metadata": {}, "outputs": [ @@ -793,7 +768,7 @@ }, { "cell_type": "code", - "execution_count": 22, + "execution_count": 21, "id": "76e262a0", "metadata": {}, "outputs": [ @@ -832,7 +807,7 @@ }, { "cell_type": "code", - "execution_count": 23, + "execution_count": 22, "id": "47985091", "metadata": {}, "outputs": [ @@ -871,7 +846,7 @@ }, { "cell_type": "code", - "execution_count": 24, + "execution_count": 23, "id": "7b195528", "metadata": {}, "outputs": [ @@ -892,7 +867,7 @@ }, { "cell_type": "code", - "execution_count": 25, + "execution_count": 24, "id": "6b36087e", "metadata": {}, "outputs": [ @@ -918,7 +893,7 @@ }, { "cell_type": "code", - "execution_count": 26, + "execution_count": 25, "id": "b4da1d88", "metadata": {}, "outputs": [ @@ -967,7 +942,7 @@ }, { "cell_type": "code", - "execution_count": 27, + "execution_count": 26, "id": "579a89ae", "metadata": {}, "outputs": [ @@ -999,7 +974,7 @@ }, { "cell_type": "code", - "execution_count": 28, + "execution_count": 27, "id": "7a335371", "metadata": {}, "outputs": [ @@ -1026,7 +1001,7 @@ }, { "cell_type": "code", - "execution_count": 29, + "execution_count": 28, "id": "bc09b423", "metadata": {}, "outputs": [ @@ -1075,7 +1050,7 @@ }, { "cell_type": "code", - "execution_count": 30, + "execution_count": 29, "id": "6546c149", "metadata": {}, "outputs": [ @@ -1099,7 +1074,7 @@ }, { "cell_type": "code", - "execution_count": 31, + "execution_count": 30, "id": "d291fc57", "metadata": {}, "outputs": [ @@ -1109,7 +1084,7 @@ "" ] }, - "execution_count": 31, + "execution_count": 30, "metadata": {}, "output_type": "execute_result" }, @@ -1142,7 +1117,7 @@ }, { "cell_type": "code", - "execution_count": 32, + "execution_count": 31, "id": "f8d45f0e", "metadata": {}, "outputs": [ @@ -1169,7 +1144,7 @@ }, { "cell_type": "code", - "execution_count": 33, + "execution_count": 32, "id": "e62cabae", "metadata": {}, "outputs": [ @@ -1218,7 +1193,7 @@ }, { "cell_type": "code", - "execution_count": 34, + "execution_count": 33, "id": "0abb2c29", "metadata": {}, "outputs": [ @@ -1249,7 +1224,7 @@ }, { "cell_type": "code", - "execution_count": 35, + "execution_count": 34, "id": "8aa52136", "metadata": {}, "outputs": [ @@ -1275,7 +1250,7 @@ }, { "cell_type": "code", - "execution_count": 36, + "execution_count": 35, "id": "91b0e630", "metadata": {}, "outputs": [ @@ -1324,7 +1299,7 @@ }, { "cell_type": "code", - "execution_count": 37, + "execution_count": 36, "id": "f32343c4", "metadata": {}, "outputs": [ @@ -1345,7 +1320,7 @@ }, { "cell_type": "code", - "execution_count": 38, + "execution_count": 37, "id": "6eef08f7", "metadata": {}, "outputs": [ @@ -1371,7 +1346,7 @@ }, { "cell_type": "code", - "execution_count": 39, + "execution_count": 38, "id": "48807ab0", "metadata": {}, "outputs": [