From 4209ac8fa33f2db90148056a9c7bf010b0de0b1b Mon Sep 17 00:00:00 2001
From: tanner-andrulis <andrulis@mit.edu>
Date: Thu, 5 Sep 2024 09:31:52 -0400
Subject: [PATCH] Auto documentation

---
 .github/workflows/main.yml | 43 ++++++++++++++++++++++++++++++++++++++
 Doxyfile                   |  6 +++---
 2 files changed, 46 insertions(+), 3 deletions(-)
 create mode 100644 .github/workflows/main.yml

diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
new file mode 100644
index 0000000..a98bf54
--- /dev/null
+++ b/.github/workflows/main.yml
@@ -0,0 +1,43 @@
+# This is a basic workflow to help you get started with Actions
+
+name: Doxygen Action
+
+# Controls when the action will run. Triggers the workflow on push or pull request
+# events but only for the main branch
+on:
+  push:
+    branches: [ main ]
+
+
+  
+# A workflow run is made up of one or more jobs that can run sequentially or in parallel
+jobs:
+  # This workflow contains a single job called "build"
+  build:
+    # The type of runner that the job will run on
+    runs-on: ubuntu-latest
+
+    # Steps represent a sequence of tasks that will be executed as part of the job
+    steps:
+    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+    - uses: actions/checkout@v2
+        
+    # Install doxpypy
+    - name: Install doxypypy
+      run: pip install doxypypy
+
+    - name: Doxygen Action
+      uses: mattnotmitt/doxygen-action@v1.1.0
+      with:
+        # Path to Doxyfile
+        doxyfile-path: "./Doxyfile" # default is ./Doxyfile
+        # Working directory
+        working-directory: "." # default is .
+    
+    - name: Deploy
+      uses: peaceiris/actions-gh-pages@v3
+      with:
+        github_token: ${{ secrets.GITHUB_TOKEN }}
+        # Default Doxyfile build documentation to html directory. 
+        # Change the directory if changes in Doxyfile
+        publish_dir: ./html
\ No newline at end of file
diff --git a/Doxyfile b/Doxyfile
index 53a4b55..8fc5544 100644
--- a/Doxyfile
+++ b/Doxyfile
@@ -32,7 +32,7 @@ DOXYFILE_ENCODING      = UTF-8
 # title of most generated pages and in a few other places.
 # The default value is: My Project.
 
-PROJECT_NAME           = "TimeloopFE"
+PROJECT_NAME           = "PyTimeloop"
 
 # The PROJECT_NUMBER tag can be used to enter a project or revision number. This
 # could be handy for archiving the generated documentation or if some version
@@ -864,7 +864,7 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = README.md timeloopfe/v4 timeloopfe/common
+INPUT                  = README.md pytimeloop/timeloopfe/v4 pytimeloop/timeloopfe/common
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
@@ -2236,7 +2236,7 @@ SEARCH_INCLUDES        = YES
 # preprocessor.
 # This tag requires that the tag SEARCH_INCLUDES is set to YES.
 
-INCLUDE_PATH           = timeloopfe timeloopfe/v3 timeloopfe/v4 timeloopfe/common
+INCLUDE_PATH           = timeloopfe pytimeloop/timeloopfe/v3 pytimeloop/timeloopfe/v4 pytimeloop/timeloopfe/common
 
 # You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
 # patterns (like *.h and *.hpp) to filter out the header-files in the